Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
RTL8CO15255 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC11.91□□□□□ -0.5
RTL8CO15255 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC11.91□□□□□ -0.5
RTL8CO15255 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC11.91□□□□□ -0.5
RTL8CO15255 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC11.91□□□□□ -0.5
RTL8CO15255 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.91□□□□□ -0.5
RTL8CO15255 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RTL8CO15255 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC11.91□□□□□ -0.5
RTL8CO15255 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTL8CO15255 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
RTL8CO15255 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTL8CO15255 MYLKP1-201ENST00000509077 1580 ntBASIC11.91□□□□□ -0.5
RTL8CO15255 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC11.91□□□□□ -0.5
RTL8CO15255 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTL8CO15255 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC11.91□□□□□ -0.5
RTL8CO15255 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTL8CO15255 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTL8CO15255 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC11.91□□□□□ -0.5
RTL8CO15255 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RTL8CO15255 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTL8CO15255 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTL8CO15255 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RTL8CO15255 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RTL8CO15255 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC11.91□□□□□ -0.5
RTL8CO15255 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RTL8CO15255 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC11.91□□□□□ -0.5
RTL8CO15255 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC11.9□□□□□ -0.5
RTL8CO15255 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
RTL8CO15255 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC11.9□□□□□ -0.5
RTL8CO15255 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC11.9□□□□□ -0.5
RTL8CO15255 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
RTL8CO15255 CD9-202ENST00000382515 1229 ntTSL 5 BASIC11.9□□□□□ -0.5
RTL8CO15255 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RTL8CO15255 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RTL8CO15255 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.9□□□□□ -0.5
RTL8CO15255 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC11.9□□□□□ -0.5
RTL8CO15255 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.9□□□□□ -0.5
RTL8CO15255 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.9□□□□□ -0.5
RTL8CO15255 AC112698.1-201ENST00000510299 916 ntBASIC11.9□□□□□ -0.5
RTL8CO15255 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC11.9□□□□□ -0.5
RTL8CO15255 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC11.9□□□□□ -0.5
RTL8CO15255 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC11.9□□□□□ -0.5
RTL8CO15255 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC11.9□□□□□ -0.5
RTL8CO15255 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
RTL8CO15255 MIR3197-201ENST00000582241 73 ntBASIC11.9□□□□□ -0.5
RTL8CO15255 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC11.9□□□□□ -0.5
RTL8CO15255 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.9□□□□□ -0.5
RTL8CO15255 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.9□□□□□ -0.5
RTL8CO15255 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 MIR1199-201ENST00000621445 119 ntBASIC11.9□□□□□ -0.5
RTL8CO15255 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC11.9□□□□□ -0.5
RTL8CO15255 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC11.9□□□□□ -0.5
RTL8CO15255 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.9□□□□□ -0.5
RTL8CO15255 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
RTL8CO15255 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC11.9□□□□□ -0.5
RTL8CO15255 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RTL8CO15255 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
RTL8CO15255 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
RTL8CO15255 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
RTL8CO15255 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC11.9□□□□□ -0.51
RTL8CO15255 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RTL8CO15255 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTL8CO15255 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RTL8CO15255 LINC01126-201ENST00000623515 1646 ntBASIC11.89□□□□□ -0.51
RTL8CO15255 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
RTL8CO15255 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTL8CO15255 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
RTL8CO15255 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTL8CO15255 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTL8CO15255 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC11.89□□□□□ -0.51
RTL8CO15255 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
RTL8CO15255 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTL8CO15255 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RTL8CO15255 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RTL8CO15255 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTL8CO15255 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
RTL8CO15255 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RTL8CO15255 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11.89□□□□□ -0.51
RTL8CO15255 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
RTL8CO15255 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms