Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NDUFA1O15239 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.29□□□□□ -0.44
NDUFA1O15239 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.29□□□□□ -0.44
NDUFA1O15239 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NDUFA1O15239 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NDUFA1O15239 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC12.29□□□□□ -0.44
NDUFA1O15239 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC12.29□□□□□ -0.44
NDUFA1O15239 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC12.29□□□□□ -0.44
NDUFA1O15239 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
NDUFA1O15239 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC12.29□□□□□ -0.44
NDUFA1O15239 AC073195.1-201ENST00000607241 877 ntBASIC12.29□□□□□ -0.44
NDUFA1O15239 FAM197Y4-202ENST00000622692 608 ntBASIC12.29□□□□□ -0.44
NDUFA1O15239 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC12.29□□□□□ -0.44
NDUFA1O15239 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NDUFA1O15239 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
NDUFA1O15239 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.29□□□□□ -0.44
NDUFA1O15239 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NDUFA1O15239 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC12.29□□□□□ -0.44
NDUFA1O15239 F11R-206ENST00000621309 4770 ntTSL 5 BASIC12.29□□□□□ -0.44
NDUFA1O15239 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NDUFA1O15239 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NDUFA1O15239 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NDUFA1O15239 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NDUFA1O15239 AC018695.7-201ENST00000624587 2492 ntBASIC12.29□□□□□ -0.44
NDUFA1O15239 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NDUFA1O15239 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NDUFA1O15239 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
NDUFA1O15239 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
NDUFA1O15239 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
NDUFA1O15239 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
NDUFA1O15239 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
NDUFA1O15239 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.28□□□□□ -0.44
NDUFA1O15239 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NDUFA1O15239 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NDUFA1O15239 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.28□□□□□ -0.44
NDUFA1O15239 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
NDUFA1O15239 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 ENSA-205ENST00000361532 792 ntTSL 2 BASIC12.28□□□□□ -0.44
NDUFA1O15239 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC12.28□□□□□ -0.44
NDUFA1O15239 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC12.28□□□□□ -0.44
NDUFA1O15239 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NDUFA1O15239 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.28□□□□□ -0.44
NDUFA1O15239 RARRES2P10-201ENST00000564312 460 ntBASIC12.28□□□□□ -0.44
NDUFA1O15239 CKBP1-201ENST00000565489 1086 ntBASIC12.28□□□□□ -0.44
NDUFA1O15239 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
NDUFA1O15239 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
NDUFA1O15239 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NDUFA1O15239 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NDUFA1O15239 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC12.28□□□□□ -0.44
NDUFA1O15239 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
NDUFA1O15239 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.28□□□□□ -0.44
NDUFA1O15239 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC12.28□□□□□ -0.44
NDUFA1O15239 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
NDUFA1O15239 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC12.28□□□□□ -0.44
NDUFA1O15239 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.28□□□□□ -0.44
NDUFA1O15239 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.28□□□□□ -0.44
NDUFA1O15239 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.28□□□□□ -0.44
NDUFA1O15239 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
NDUFA1O15239 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
NDUFA1O15239 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NDUFA1O15239 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NDUFA1O15239 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NDUFA1O15239 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NDUFA1O15239 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
NDUFA1O15239 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NDUFA1O15239 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
NDUFA1O15239 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC12.27□□□□□ -0.44
NDUFA1O15239 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.27□□□□□ -0.44
NDUFA1O15239 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
NDUFA1O15239 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
NDUFA1O15239 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC12.27□□□□□ -0.44
NDUFA1O15239 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
NDUFA1O15239 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
NDUFA1O15239 FLJ16779-201ENST00000612722 7638 ntBASIC12.27□□□□□ -0.45
NDUFA1O15239 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms