Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LOC285556D6RIA3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
LOC285556D6RIA3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.33■□□□□ 0.85
LOC285556D6RIA3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.33■□□□□ 0.85
LOC285556D6RIA3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
LOC285556D6RIA3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LOC285556D6RIA3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.33■□□□□ 0.85
LOC285556D6RIA3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.33■□□□□ 0.85
LOC285556D6RIA3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LOC285556D6RIA3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LOC285556D6RIA3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.33■□□□□ 0.84
LOC285556D6RIA3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LOC285556D6RIA3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LOC285556D6RIA3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LOC285556D6RIA3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LOC285556D6RIA3 CNN2P11-201ENST00000429351 262 ntBASIC20.33■□□□□ 0.84
LOC285556D6RIA3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.33■□□□□ 0.84
LOC285556D6RIA3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.33■□□□□ 0.84
LOC285556D6RIA3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.33■□□□□ 0.84
LOC285556D6RIA3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.33■□□□□ 0.84
LOC285556D6RIA3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
LOC285556D6RIA3 STK25P1-201ENST00000585406 838 ntBASIC20.33■□□□□ 0.84
LOC285556D6RIA3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.33■□□□□ 0.84
LOC285556D6RIA3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC20.33■□□□□ 0.84
LOC285556D6RIA3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.33■□□□□ 0.84
LOC285556D6RIA3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LOC285556D6RIA3 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 AP002414.1-201ENST00000391405 1147 ntBASIC20.32■□□□□ 0.84
LOC285556D6RIA3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 AC004790.2-201ENST00000623588 572 ntBASIC20.32■□□□□ 0.84
LOC285556D6RIA3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
LOC285556D6RIA3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.31■□□□□ 0.84
LOC285556D6RIA3 PRSS29P-201ENST00000440800 595 ntBASIC20.31■□□□□ 0.84
LOC285556D6RIA3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 KRT19P2-202ENST00000557173 1012 ntBASIC20.31■□□□□ 0.84
LOC285556D6RIA3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 SIGLEC30P-201ENST00000455569 941 ntBASIC20.31■□□□□ 0.84
LOC285556D6RIA3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.31■□□□□ 0.84
LOC285556D6RIA3 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC285556D6RIA3 AC009949.1-201ENST00000623048 1830 ntBASIC20.3■□□□□ 0.84
LOC285556D6RIA3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.3■□□□□ 0.84
LOC285556D6RIA3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LOC285556D6RIA3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.3■□□□□ 0.84
LOC285556D6RIA3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC20.3■□□□□ 0.84
LOC285556D6RIA3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.3■□□□□ 0.84
LOC285556D6RIA3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.3■□□□□ 0.84
LOC285556D6RIA3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC285556D6RIA3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC285556D6RIA3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC285556D6RIA3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LOC285556D6RIA3 RHOQP3-201ENST00000437982 621 ntBASIC20.3■□□□□ 0.84
LOC285556D6RIA3 VN2R19P-201ENST00000442399 1052 ntBASIC20.3■□□□□ 0.84
LOC285556D6RIA3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
LOC285556D6RIA3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.3■□□□□ 0.84
LOC285556D6RIA3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.3■□□□□ 0.84
LOC285556D6RIA3 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.3■□□□□ 0.84
LOC285556D6RIA3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms