Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 NKAPP1-205ENST00000585790 367 ntBASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRABD2BA6NFA1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 AC020763.4-201ENST00000623414 4170 ntBASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 AC009947.1-201ENST00000444350 727 ntBASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 AC005829.1-201ENST00000570002 483 ntBASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 IRX1P1-201ENST00000438849 1838 ntBASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 AC125634.1-201ENST00000438758 1403 ntBASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRABD2BA6NFA1 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 AL049812.1-201ENST00000432563 2267 ntBASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 MTCL1P1-201ENST00000446207 792 ntBASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRABD2BA6NFA1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRABD2BA6NFA1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRABD2BA6NFA1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TRABD2BA6NFA1 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRABD2BA6NFA1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRABD2BA6NFA1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRABD2BA6NFA1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRABD2BA6NFA1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.16■□□□□ 0.34
TRABD2BA6NFA1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRABD2BA6NFA1 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRABD2BA6NFA1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRABD2BA6NFA1 FAM8A3P-201ENST00000427218 844 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms