Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 KRT18P56-201ENST00000507275 550 ntBASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 AL512604.3-201ENST00000569583 964 ntBASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 AL031432.5-201ENST00000641059 760 ntBASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC21.56■■□□□ 1.04
DDX49Q9Y6V7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 AC036111.1-201ENST00000533973 1582 ntBASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX49Q9Y6V7 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 AC092597.1-201ENST00000487352 616 ntBASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 AC116407.4-201ENST00000623319 1061 ntBASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX49Q9Y6V7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX49Q9Y6V7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX49Q9Y6V7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX49Q9Y6V7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX49Q9Y6V7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC21.53■■□□□ 1.04
DDX49Q9Y6V7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
DDX49Q9Y6V7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX49Q9Y6V7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX49Q9Y6V7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms