Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS1Q9Y6A9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS1Q9Y6A9 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS1Q9Y6A9 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS1Q9Y6A9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS1Q9Y6A9 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS1Q9Y6A9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS1Q9Y6A9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS1Q9Y6A9 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SPCS1Q9Y6A9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS1Q9Y6A9 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS1Q9Y6A9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS1Q9Y6A9 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS1Q9Y6A9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
SPCS1Q9Y6A9 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS1Q9Y6A9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
SPCS1Q9Y6A9 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS1Q9Y6A9 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS1Q9Y6A9 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS1Q9Y6A9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS1Q9Y6A9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS1Q9Y6A9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS1Q9Y6A9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.44
SPCS1Q9Y6A9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SPCS1Q9Y6A9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 PTPA-214ENST00000423100 988 ntTSL 2 BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 FAM21FP-204ENST00000608637 956 ntBASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.27□□□□□ -0.45
SPCS1Q9Y6A9 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 AC138035.3-201ENST00000622706 2791 ntBASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SPCS1Q9Y6A9 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms