Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 POR-209ENST00000439269 1858 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 AC008608.2-201ENST00000606089 416 ntBASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00588Q9Y4M8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 HTR7P1-202ENST00000624664 4411 ntBASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 AC090164.3-201ENST00000610780 2143 ntBASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 AC097374.2-201ENST00000618617 1306 ntBASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 KRT8P47-201ENST00000604727 1398 ntBASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00588Q9Y4M8 FLYWCH1P1-201ENST00000460917 1874 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms