Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN1Q9UMX0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 FLJ13224-201ENST00000313737 1514 ntBASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 AC026396.1-201ENST00000419388 421 ntBASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 AL031008.1-201ENST00000619963 541 ntBASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 BICD1-207ENST00000551848 1962 ntBASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN1Q9UMX0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 AC079781.3-201ENST00000449110 356 ntBASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 AF238378.1-201ENST00000526806 358 ntBASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 AL121912.1-201ENST00000603683 238 ntBASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 AP000997.3-201ENST00000623333 2250 ntBASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 ABALON-201ENST00000629058 1903 ntBASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 AC010460.3-201ENST00000511359 1579 ntBASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.19■□□□□ 0.66
UBQLN1Q9UMX0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 AC100803.2-201ENST00000562459 1963 ntBASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
UBQLN1Q9UMX0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms