Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
FBXO40Q9UH90 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 AC087289.5-201ENST00000586076 3175 ntBASIC20.3■□□□□ 0.84
FBXO40Q9UH90 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 BX005266.1-201ENST00000473402 457 ntBASIC20.3■□□□□ 0.84
FBXO40Q9UH90 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 RNA5SP415-201ENST00000517246 115 ntBASIC20.3■□□□□ 0.84
FBXO40Q9UH90 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 AC092865.5-201ENST00000545435 363 ntBASIC20.3■□□□□ 0.84
FBXO40Q9UH90 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 AC034105.1-201ENST00000563488 319 ntBASIC20.3■□□□□ 0.84
FBXO40Q9UH90 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
FBXO40Q9UH90 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 SPDYE21P-201ENST00000413323 827 ntBASIC20.29■□□□□ 0.84
FBXO40Q9UH90 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 BX842568.4-201ENST00000421222 227 ntBASIC20.29■□□□□ 0.84
FBXO40Q9UH90 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.29■□□□□ 0.84
FBXO40Q9UH90 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 MED15P5-201ENST00000423150 992 ntBASIC20.28■□□□□ 0.84
FBXO40Q9UH90 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 AC006557.2-201ENST00000592985 1240 ntBASIC20.28■□□□□ 0.84
FBXO40Q9UH90 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 AC073592.5-201ENST00000624854 528 ntBASIC20.28■□□□□ 0.84
FBXO40Q9UH90 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.28■□□□□ 0.84
FBXO40Q9UH90 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
FBXO40Q9UH90 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms