Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 GCSHP2-201ENST00000560971 527 ntBASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 FER1L4-210ENST00000615531 5998 ntBASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 AL023973.1-201ENST00000624619 620 ntBASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LINC00474Q9P2X8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 MST1L-201ENST00000442552 2185 ntBASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 CD70-202ENST00000423145 881 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 KRT18P57-201ENST00000443599 1254 ntBASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 FAM210CP-201ENST00000445714 574 ntBASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 AC011558.1-201ENST00000623459 338 ntBASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 AL590326.2-201ENST00000625139 305 ntBASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 AC090164.3-201ENST00000610780 2143 ntBASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
LINC00474Q9P2X8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 AC009053.2-201ENST00000563701 2365 ntBASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 KRT89P-201ENST00000620027 1478 ntBASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 AC117947.1-201ENST00000427448 529 ntBASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC11.71□□□□□ -0.53
LINC00474Q9P2X8 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms