Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.74■□□□□ 0.27
RLIMQ9NVW2 AC022211.2-201ENST00000585075 2527 ntBASIC16.73■□□□□ 0.27
RLIMQ9NVW2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 MIR3917-201ENST00000580971 93 ntBASIC16.73■□□□□ 0.27
RLIMQ9NVW2 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RLIMQ9NVW2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.72■□□□□ 0.27
RLIMQ9NVW2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 AC092865.7-201ENST00000641832 219 ntBASIC16.72■□□□□ 0.27
RLIMQ9NVW2 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.72■□□□□ 0.27
RLIMQ9NVW2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 AC084018.2-201ENST00000613093 2607 ntBASIC16.71■□□□□ 0.27
RLIMQ9NVW2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 KRT18P55-202ENST00000578578 1546 ntBASIC16.71■□□□□ 0.27
RLIMQ9NVW2 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 AL138966.2-201ENST00000621997 464 ntBASIC16.71■□□□□ 0.27
RLIMQ9NVW2 AL157888.1-201ENST00000631930 593 ntBASIC16.71■□□□□ 0.27
RLIMQ9NVW2 AC141257.4-201ENST00000634557 245 ntBASIC16.71■□□□□ 0.27
RLIMQ9NVW2 AC136944.6-201ENST00000634818 245 ntBASIC16.71■□□□□ 0.27
RLIMQ9NVW2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RLIMQ9NVW2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms