Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 NEK4P2-201ENST00000580004 1012 ntBASIC16.91■□□□□ 0.3
SLC6A13Q9NSD5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A13Q9NSD5 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A13Q9NSD5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A13Q9NSD5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A13Q9NSD5 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A13Q9NSD5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A13Q9NSD5 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A13Q9NSD5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A13Q9NSD5 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A13Q9NSD5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A13Q9NSD5 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
SLC6A13Q9NSD5 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SLC6A13Q9NSD5 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC6A13Q9NSD5 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC6A13Q9NSD5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC6A13Q9NSD5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 MMP23A-201ENST00000234610 1017 ntBASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 AC092865.7-201ENST00000641832 219 ntBASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC6A13Q9NSD5 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC6A13Q9NSD5 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC6A13Q9NSD5 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 HMGA1P5-201ENST00000412453 271 ntBASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 ECEL1P3-201ENST00000427961 737 ntBASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 KRT8P47-201ENST00000604727 1398 ntBASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
SLC6A13Q9NSD5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A13Q9NSD5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A13Q9NSD5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SLC6A13Q9NSD5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.88■□□□□ 0.29
SLC6A13Q9NSD5 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A13Q9NSD5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC6A13Q9NSD5 AC011676.5-201ENST00000624864 2660 ntBASIC16.88■□□□□ 0.29
SLC6A13Q9NSD5 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A13Q9NSD5 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC6A13Q9NSD5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A13Q9NSD5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC6A13Q9NSD5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC6A13Q9NSD5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A13Q9NSD5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms