Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 CDCA4P2-201ENST00000441182 718 ntBASIC21.19■□□□□ 0.98
RTN4Q9NQC3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.19■□□□□ 0.98
RTN4Q9NQC3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTN4Q9NQC3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 AC106886.4-201ENST00000623557 2502 ntBASIC21.18■□□□□ 0.98
RTN4Q9NQC3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.18■□□□□ 0.98
RTN4Q9NQC3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.18■□□□□ 0.98
RTN4Q9NQC3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 MIR5787-201ENST00000611784 55 ntBASIC21.18■□□□□ 0.98
RTN4Q9NQC3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 AL356488.3-201ENST00000608574 2888 ntBASIC21.18■□□□□ 0.98
RTN4Q9NQC3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RTN4Q9NQC3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.17■□□□□ 0.98
RTN4Q9NQC3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTN4Q9NQC3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 AC007950.2-201ENST00000615045 2347 ntBASIC21.16■□□□□ 0.98
RTN4Q9NQC3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.16■□□□□ 0.98
RTN4Q9NQC3 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms