Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 AC022616.7-201ENST00000525383 220 ntBASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LIN28AQ9H9Z2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 NKILA-202ENST00000614771 2598 ntBASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 KRT18P38-201ENST00000449496 1282 ntBASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 AC092647.4-201ENST00000457211 535 ntBASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 HEIH-201ENST00000623091 1652 ntBASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
LIN28AQ9H9Z2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 AL357033.4-201ENST00000617703 1807 ntBASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 AL031432.5-201ENST00000641059 760 ntBASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LIN28AQ9H9Z2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms