Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 AL512604.3-201ENST00000569583 964 ntBASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 AC008687.5-201ENST00000593746 558 ntBASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 AD000864.1-201ENST00000624076 2295 ntBASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 HLA-J-201ENST00000462773 1622 ntBASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBB1Q9H4B7 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 AC113404.2-201ENST00000507884 177 ntBASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBB1Q9H4B7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 GCSHP2-201ENST00000560971 527 ntBASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TUBB1Q9H4B7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
TUBB1Q9H4B7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.27■□□□□ 0.35
TUBB1Q9H4B7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBB1Q9H4B7 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBB1Q9H4B7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBB1Q9H4B7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.27■□□□□ 0.35
TUBB1Q9H4B7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TUBB1Q9H4B7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TUBB1Q9H4B7 AC138932.1-201ENST00000534164 6830 ntBASIC17.27■□□□□ 0.35
TUBB1Q9H4B7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBB1Q9H4B7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.27■□□□□ 0.35
TUBB1Q9H4B7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.27■□□□□ 0.35
TUBB1Q9H4B7 KRT8P47-201ENST00000604727 1398 ntBASIC17.27■□□□□ 0.35
TUBB1Q9H4B7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.27■□□□□ 0.35
TUBB1Q9H4B7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TUBB1Q9H4B7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TUBB1Q9H4B7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.26■□□□□ 0.35
TUBB1Q9H4B7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms