Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC012640.2-201ENST00000561606 901 ntBASIC18.67■□□□□ 0.58
LRRC3Q9BY71 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC3Q9BY71 NKAPP1-205ENST00000585790 367 ntBASIC18.67■□□□□ 0.58
LRRC3Q9BY71 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
LRRC3Q9BY71 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC3Q9BY71 GPALPP1-207ENST00000611650 899 ntBASIC18.67■□□□□ 0.58
LRRC3Q9BY71 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LRRC3Q9BY71 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC3Q9BY71 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC3Q9BY71 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRC3Q9BY71 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC3Q9BY71 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC3Q9BY71 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LRRC3Q9BY71 AC010460.3-201ENST00000511359 1579 ntBASIC18.67■□□□□ 0.58
LRRC3Q9BY71 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LRRC3Q9BY71 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC3Q9BY71 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.66■□□□□ 0.58
LRRC3Q9BY71 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 DUTP2-201ENST00000519164 463 ntBASIC18.66■□□□□ 0.58
LRRC3Q9BY71 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 AL139288.1-201ENST00000623748 933 ntBASIC18.66■□□□□ 0.58
LRRC3Q9BY71 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LRRC3Q9BY71 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 RPS2P28-201ENST00000314255 741 ntBASIC18.65■□□□□ 0.58
LRRC3Q9BY71 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 KRT18P58-201ENST00000527480 1120 ntBASIC18.65■□□□□ 0.58
LRRC3Q9BY71 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 AC117500.6-201ENST00000624871 588 ntBASIC18.65■□□□□ 0.58
LRRC3Q9BY71 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 AL138781.2-201ENST00000617896 1843 ntBASIC18.65■□□□□ 0.58
LRRC3Q9BY71 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC3Q9BY71 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC3Q9BY71 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.63■□□□□ 0.57
LRRC3Q9BY71 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms