Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPN18Q99952 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN18Q99952 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN18Q99952 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PTPN18Q99952 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN18Q99952 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN18Q99952 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN18Q99952 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.44■□□□□ 0.86
PTPN18Q99952 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPN18Q99952 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC20.44■□□□□ 0.86
PTPN18Q99952 AC004449.1-201ENST00000564240 433 ntBASIC20.44■□□□□ 0.86
PTPN18Q99952 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.44■□□□□ 0.86
PTPN18Q99952 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN18Q99952 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.44■□□□□ 0.86
PTPN18Q99952 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN18Q99952 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN18Q99952 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN18Q99952 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN18Q99952 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN18Q99952 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PTPN18Q99952 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN18Q99952 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN18Q99952 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN18Q99952 GMCL1P1-201ENST00000463439 1581 ntBASIC20.43■□□□□ 0.86
PTPN18Q99952 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PTPN18Q99952 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.43■□□□□ 0.86
PTPN18Q99952 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
PTPN18Q99952 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN18Q99952 AC004461.1-201ENST00000412461 403 ntBASIC20.43■□□□□ 0.86
PTPN18Q99952 ACTG1P14-201ENST00000446382 1122 ntBASIC20.43■□□□□ 0.86
PTPN18Q99952 AC074386.1-202ENST00000463561 864 ntBASIC20.43■□□□□ 0.86
PTPN18Q99952 HLA-J-203ENST00000494367 1087 ntBASIC20.43■□□□□ 0.86
PTPN18Q99952 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.43■□□□□ 0.86
PTPN18Q99952 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.43■□□□□ 0.86
PTPN18Q99952 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.43■□□□□ 0.86
PTPN18Q99952 AC138761.1-201ENST00000584393 385 ntBASIC20.43■□□□□ 0.86
PTPN18Q99952 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
PTPN18Q99952 AC005498.2-205ENST00000593218 784 ntBASIC20.43■□□□□ 0.86
PTPN18Q99952 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.43■□□□□ 0.86
PTPN18Q99952 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN18Q99952 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.43■□□□□ 0.86
PTPN18Q99952 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN18Q99952 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.43■□□□□ 0.86
PTPN18Q99952 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN18Q99952 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PTPN18Q99952 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.42■□□□□ 0.86
PTPN18Q99952 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN18Q99952 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN18Q99952 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN18Q99952 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN18Q99952 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.42■□□□□ 0.86
PTPN18Q99952 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN18Q99952 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN18Q99952 MRPL20P1-201ENST00000400819 433 ntBASIC20.42■□□□□ 0.86
PTPN18Q99952 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN18Q99952 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.42■□□□□ 0.86
PTPN18Q99952 PAWRP1-201ENST00000451083 565 ntBASIC20.42■□□□□ 0.86
PTPN18Q99952 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.42■□□□□ 0.86
PTPN18Q99952 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.42■□□□□ 0.86
PTPN18Q99952 PRR29-209ENST00000582540 967 ntTSL 2 BASIC20.42■□□□□ 0.86
PTPN18Q99952 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PTPN18Q99952 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.42■□□□□ 0.86
PTPN18Q99952 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
PTPN18Q99952 AC091812.2-201ENST00000619081 385 ntBASIC20.42■□□□□ 0.86
PTPN18Q99952 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.42■□□□□ 0.86
PTPN18Q99952 AC105339.1-204ENST00000636249 355 ntBASIC20.42■□□□□ 0.86
PTPN18Q99952 AL805961.1-202ENST00000641562 540 ntBASIC20.42■□□□□ 0.86
PTPN18Q99952 AC092902.6-201ENST00000641783 218 ntBASIC20.42■□□□□ 0.86
PTPN18Q99952 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PTPN18Q99952 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PTPN18Q99952 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.42■□□□□ 0.86
PTPN18Q99952 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PTPN18Q99952 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN18Q99952 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN18Q99952 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN18Q99952 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PTPN18Q99952 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN18Q99952 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PTPN18Q99952 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.41■□□□□ 0.86
PTPN18Q99952 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.41■□□□□ 0.86
PTPN18Q99952 AC109322.1-201ENST00000524499 1264 ntBASIC20.41■□□□□ 0.86
PTPN18Q99952 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.41■□□□□ 0.86
PTPN18Q99952 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN18Q99952 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.41■□□□□ 0.86
PTPN18Q99952 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.41■□□□□ 0.86
PTPN18Q99952 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.41■□□□□ 0.86
PTPN18Q99952 AC004835.2-201ENST00000603762 682 ntBASIC20.41■□□□□ 0.86
PTPN18Q99952 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC20.41■□□□□ 0.86
PTPN18Q99952 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN18Q99952 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN18Q99952 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PTPN18Q99952 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.41■□□□□ 0.86
PTPN18Q99952 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN18Q99952 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN18Q99952 ESPNP-201ENST00000270691 2015 ntBASIC20.41■□□□□ 0.86
PTPN18Q99952 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN18Q99952 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PTPN18Q99952 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
PTPN18Q99952 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PTPN18Q99952 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms