Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AL157888.1-201ENST00000631930 593 ntBASIC17.95■□□□□ 0.46
CPNE1Q99829 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
CPNE1Q99829 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE1Q99829 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE1Q99829 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE1Q99829 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CPNE1Q99829 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.95■□□□□ 0.46
CPNE1Q99829 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE1Q99829 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CPNE1Q99829 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE1Q99829 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE1Q99829 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE1Q99829 LINC00602-201ENST00000629776 2065 ntBASIC17.95■□□□□ 0.46
CPNE1Q99829 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE1Q99829 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CPNE1Q99829 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE1Q99829 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.95■□□□□ 0.46
CPNE1Q99829 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE1Q99829 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CPNE1Q99829 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
CPNE1Q99829 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CPNE1Q99829 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.94■□□□□ 0.46
CPNE1Q99829 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE1Q99829 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE1Q99829 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE1Q99829 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.94■□□□□ 0.46
CPNE1Q99829 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CPNE1Q99829 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE1Q99829 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE1Q99829 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.94■□□□□ 0.46
CPNE1Q99829 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.94■□□□□ 0.46
CPNE1Q99829 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE1Q99829 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE1Q99829 LINC00304-203ENST00000565008 1864 ntBASIC17.94■□□□□ 0.46
CPNE1Q99829 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CPNE1Q99829 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.94■□□□□ 0.46
CPNE1Q99829 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE1Q99829 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE1Q99829 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE1Q99829 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CPNE1Q99829 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
CPNE1Q99829 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE1Q99829 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.93■□□□□ 0.46
CPNE1Q99829 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CPNE1Q99829 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE1Q99829 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE1Q99829 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.93■□□□□ 0.46
CPNE1Q99829 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.93■□□□□ 0.46
CPNE1Q99829 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE1Q99829 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE1Q99829 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.93■□□□□ 0.46
CPNE1Q99829 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CPNE1Q99829 ECEL1P3-201ENST00000427961 737 ntBASIC17.93■□□□□ 0.46
CPNE1Q99829 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE1Q99829 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.93■□□□□ 0.46
CPNE1Q99829 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE1Q99829 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.93■□□□□ 0.46
CPNE1Q99829 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE1Q99829 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE1Q99829 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE1Q99829 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.93■□□□□ 0.46
CPNE1Q99829 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CPNE1Q99829 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE1Q99829 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE1Q99829 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.93■□□□□ 0.46
CPNE1Q99829 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE1Q99829 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE1Q99829 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CPNE1Q99829 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CPNE1Q99829 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.92■□□□□ 0.46
CPNE1Q99829 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CPNE1Q99829 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CPNE1Q99829 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CPNE1Q99829 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE1Q99829 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.92■□□□□ 0.46
CPNE1Q99829 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CPNE1Q99829 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 HLA-J-201ENST00000462773 1622 ntBASIC17.92■□□□□ 0.46
CPNE1Q99829 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE1Q99829 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.92■□□□□ 0.46
CPNE1Q99829 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.92■□□□□ 0.46
CPNE1Q99829 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE1Q99829 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CPNE1Q99829 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.92■□□□□ 0.46
CPNE1Q99829 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CPNE1Q99829 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CPNE1Q99829 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CPNE1Q99829 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms