Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.04■□□□□ -0
CCL13Q99616 TSSC2-201ENST00000450217 709 ntBASIC15.04■□□□□ -0
CCL13Q99616 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL13Q99616 AC090616.6-201ENST00000582640 721 ntBASIC15.04■□□□□ -0
CCL13Q99616 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL13Q99616 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CCL13Q99616 AC124864.1-201ENST00000623408 392 ntBASIC15.04■□□□□ -0
CCL13Q99616 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.04■□□□□ -0
CCL13Q99616 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CCL13Q99616 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.04■□□□□ -0
CCL13Q99616 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CCL13Q99616 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.04■□□□□ -0
CCL13Q99616 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL13Q99616 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.04■□□□□ -0
CCL13Q99616 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL13Q99616 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CCL13Q99616 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
CCL13Q99616 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL13Q99616 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CCL13Q99616 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.04■□□□□ -0
CCL13Q99616 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.04■□□□□ -0
CCL13Q99616 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.03■□□□□ -0
CCL13Q99616 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
CCL13Q99616 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 FLJ13224-201ENST00000313737 1514 ntBASIC15.03■□□□□ -0
CCL13Q99616 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CCL13Q99616 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.03■□□□□ -0
CCL13Q99616 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CCL13Q99616 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC15.03■□□□□ -0
CCL13Q99616 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.03■□□□□ -0
CCL13Q99616 CHCHD2P8-201ENST00000429873 447 ntBASIC15.03■□□□□ -0
CCL13Q99616 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CCL13Q99616 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.03■□□□□ -0
CCL13Q99616 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CCL13Q99616 AC069148.1-201ENST00000608741 768 ntBASIC15.03■□□□□ -0
CCL13Q99616 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.03■□□□□ -0
CCL13Q99616 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.03■□□□□ -0
CCL13Q99616 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CCL13Q99616 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
CCL13Q99616 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCL13Q99616 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CCL13Q99616 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
CCL13Q99616 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CCL13Q99616 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.02■□□□□ -0
CCL13Q99616 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CCL13Q99616 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL13Q99616 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CCL13Q99616 KRT18P1-202ENST00000452408 1331 ntBASIC15.02■□□□□ -0
CCL13Q99616 AC022898.2-201ENST00000616822 1312 ntBASIC15.02■□□□□ -0
CCL13Q99616 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL13Q99616 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL13Q99616 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL13Q99616 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL13Q99616 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL13Q99616 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CCL13Q99616 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCL13Q99616 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
CCL13Q99616 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCL13Q99616 DUTP2-201ENST00000519164 463 ntBASIC15.02■□□□□ -0
CCL13Q99616 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.02■□□□□ -0
CCL13Q99616 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.02■□□□□ -0
CCL13Q99616 AL592071.1-201ENST00000611956 408 ntBASIC15.02■□□□□ -0
CCL13Q99616 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.02■□□□□ -0
CCL13Q99616 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.02□□□□□ -0.01
CCL13Q99616 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CCL13Q99616 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CCL13Q99616 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CCL13Q99616 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CCL13Q99616 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.02□□□□□ -0.01
CCL13Q99616 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL13Q99616 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL13Q99616 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC15.02□□□□□ -0.01
CCL13Q99616 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCL13Q99616 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.02□□□□□ -0.01
CCL13Q99616 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL13Q99616 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CCL13Q99616 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL13Q99616 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL13Q99616 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.02□□□□□ -0.01
CCL13Q99616 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCL13Q99616 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.02□□□□□ -0.01
CCL13Q99616 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCL13Q99616 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms