Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF31Q96EP0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RNF31Q96EP0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF31Q96EP0 LINC00602-201ENST00000629776 2065 ntBASIC17.3■□□□□ 0.36
RNF31Q96EP0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF31Q96EP0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
RNF31Q96EP0 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RNF31Q96EP0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
RNF31Q96EP0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.3■□□□□ 0.36
RNF31Q96EP0 AC096582.2-201ENST00000510860 516 ntBASIC17.3■□□□□ 0.36
RNF31Q96EP0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF31Q96EP0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF31Q96EP0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF31Q96EP0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF31Q96EP0 MYLKP1-201ENST00000509077 1580 ntBASIC17.3■□□□□ 0.36
RNF31Q96EP0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RNF31Q96EP0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF31Q96EP0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNF31Q96EP0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF31Q96EP0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF31Q96EP0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 NOC2LP1-202ENST00000452600 2235 ntBASIC17.29■□□□□ 0.36
RNF31Q96EP0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF31Q96EP0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF31Q96EP0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF31Q96EP0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF31Q96EP0 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 LINC01126-201ENST00000623515 1646 ntBASIC17.29■□□□□ 0.36
RNF31Q96EP0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RNF31Q96EP0 AC009113.1-201ENST00000570267 2443 ntBASIC17.29■□□□□ 0.36
RNF31Q96EP0 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RNF31Q96EP0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
RNF31Q96EP0 TSPY12P-201ENST00000421279 868 ntBASIC17.29■□□□□ 0.36
RNF31Q96EP0 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF31Q96EP0 AC011840.4-201ENST00000578471 627 ntBASIC17.29■□□□□ 0.36
RNF31Q96EP0 MIR3180-4-201ENST00000582223 153 ntBASIC17.29■□□□□ 0.36
RNF31Q96EP0 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF31Q96EP0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF31Q96EP0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.29■□□□□ 0.36
RNF31Q96EP0 AL353801.3-201ENST00000609898 542 ntBASIC17.29■□□□□ 0.36
RNF31Q96EP0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.29■□□□□ 0.36
RNF31Q96EP0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.29■□□□□ 0.36
RNF31Q96EP0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RNF31Q96EP0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RNF31Q96EP0 AL024508.2-201ENST00000607749 1894 ntBASIC17.29■□□□□ 0.36
RNF31Q96EP0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 MIR149-201ENST00000384879 89 ntBASIC17.28■□□□□ 0.36
RNF31Q96EP0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RNF31Q96EP0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.28■□□□□ 0.36
RNF31Q96EP0 LINC01711-201ENST00000598340 967 ntBASIC17.28■□□□□ 0.36
RNF31Q96EP0 TP73-AS1-207ENST00000624167 988 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms