Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 GPR32P1-201ENST00000601788 811 ntBASIC17.28■□□□□ 0.36
UBE2E3Q969T4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.28■□□□□ 0.36
UBE2E3Q969T4 AC004263.2-201ENST00000617183 678 ntBASIC17.28■□□□□ 0.36
UBE2E3Q969T4 HYMAI.1-201ENST00000620949 238 ntBASIC17.28■□□□□ 0.36
UBE2E3Q969T4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
UBE2E3Q969T4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 AL671277.2-201ENST00000458060 996 ntBASIC17.27■□□□□ 0.36
UBE2E3Q969T4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
UBE2E3Q969T4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBE2E3Q969T4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBE2E3Q969T4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.27■□□□□ 0.35
UBE2E3Q969T4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.27■□□□□ 0.35
UBE2E3Q969T4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBE2E3Q969T4 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBE2E3Q969T4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBE2E3Q969T4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.27■□□□□ 0.35
UBE2E3Q969T4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
UBE2E3Q969T4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
UBE2E3Q969T4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.26■□□□□ 0.35
UBE2E3Q969T4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 AL133373.2-201ENST00000623187 2828 ntBASIC17.26■□□□□ 0.35
UBE2E3Q969T4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 AL353692.3-201ENST00000407031 1396 ntBASIC17.26■□□□□ 0.35
UBE2E3Q969T4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
UBE2E3Q969T4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 AC134043.2-201ENST00000624206 2238 ntBASIC17.25■□□□□ 0.35
UBE2E3Q969T4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.25■□□□□ 0.35
UBE2E3Q969T4 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms