Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 KRT89P-201ENST00000620027 1478 ntBASIC21.01■□□□□ 0.95
SMARCC2Q8TAQ2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 NMU-205ENST00000511469 756 ntTSL 3 BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 AC138932.1-201ENST00000534164 6830 ntBASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 LINC00602-201ENST00000629776 2065 ntBASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC21■□□□□ 0.95
SMARCC2Q8TAQ2 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 RNF126P1-202ENST00000569893 925 ntBASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SMARCC2Q8TAQ2 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 BX276092.5-203ENST00000456199 560 ntBASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SMARCC2Q8TAQ2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 HCG11-201ENST00000411553 5696 ntBASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SMARCC2Q8TAQ2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms