Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CCDC168Q8NDH2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC168Q8NDH2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.91□□□□□ -0.02
CCDC168Q8NDH2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC168Q8NDH2 UGT1A2P-201ENST00000454886 866 ntBASIC14.91□□□□□ -0.02
CCDC168Q8NDH2 AC112698.1-201ENST00000510299 916 ntBASIC14.91□□□□□ -0.02
CCDC168Q8NDH2 AC096734.2-201ENST00000562054 433 ntBASIC14.91□□□□□ -0.02
CCDC168Q8NDH2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.91□□□□□ -0.02
CCDC168Q8NDH2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.91□□□□□ -0.02
CCDC168Q8NDH2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC168Q8NDH2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
CCDC168Q8NDH2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
CCDC168Q8NDH2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
CCDC168Q8NDH2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CCDC168Q8NDH2 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCDC168Q8NDH2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 KLF4P1-201ENST00000412782 1185 ntBASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 LINC02560-201ENST00000596379 459 ntBASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC14.9□□□□□ -0.02
CCDC168Q8NDH2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 CNN2P2-201ENST00000443536 909 ntBASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 CNN2P3-201ENST00000450201 906 ntBASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 AL136317.3-201ENST00000618497 906 ntBASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 MIR149-201ENST00000384879 89 ntBASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 AC096633.1-201ENST00000422446 749 ntBASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CCDC168Q8NDH2 AL158211.5-201ENST00000623583 2518 ntBASIC14.88□□□□□ -0.03
CCDC168Q8NDH2 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.88□□□□□ -0.03
CCDC168Q8NDH2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC168Q8NDH2 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC168Q8NDH2 SPDYE21P-201ENST00000413323 827 ntBASIC14.88□□□□□ -0.03
CCDC168Q8NDH2 AC107890.1-201ENST00000422478 521 ntBASIC14.88□□□□□ -0.03
CCDC168Q8NDH2 KRT18P32-201ENST00000424695 1287 ntBASIC14.88□□□□□ -0.03
CCDC168Q8NDH2 AC007967.3-201ENST00000434308 558 ntBASIC14.88□□□□□ -0.03
CCDC168Q8NDH2 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CCDC168Q8NDH2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC168Q8NDH2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.88□□□□□ -0.03
CCDC168Q8NDH2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.88□□□□□ -0.03
CCDC168Q8NDH2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.88□□□□□ -0.03
CCDC168Q8NDH2 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms