Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TMEFF1Q8IYR6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEFF1Q8IYR6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
TMEFF1Q8IYR6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEFF1Q8IYR6 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.77■□□□□ 0.43
TMEFF1Q8IYR6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.77■□□□□ 0.43
TMEFF1Q8IYR6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TMEFF1Q8IYR6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEFF1Q8IYR6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TMEFF1Q8IYR6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TMEFF1Q8IYR6 AC004817.3-201ENST00000602957 2129 ntBASIC17.77■□□□□ 0.43
TMEFF1Q8IYR6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 AC004832.2-201ENST00000426397 482 ntBASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.76■□□□□ 0.43
TMEFF1Q8IYR6 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 MIR1199-201ENST00000621445 119 ntBASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 AC079776.2-201ENST00000641154 1609 ntBASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TMEFF1Q8IYR6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TMEFF1Q8IYR6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms