Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 AL355312.1-201ENST00000407115 2176 ntBASIC18.65■□□□□ 0.58
TRNP1Q6NT89 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 TPSP2-201ENST00000561760 610 ntBASIC18.65■□□□□ 0.58
TRNP1Q6NT89 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRNP1Q6NT89 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRNP1Q6NT89 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRNP1Q6NT89 AC010460.3-201ENST00000511359 1579 ntBASIC18.64■□□□□ 0.58
TRNP1Q6NT89 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 AP002414.4-201ENST00000589764 1148 ntBASIC18.64■□□□□ 0.57
TRNP1Q6NT89 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRNP1Q6NT89 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 AC091076.1-201ENST00000610741 619 ntBASIC18.63■□□□□ 0.57
TRNP1Q6NT89 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TRNP1Q6NT89 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 AC096633.1-201ENST00000422446 749 ntBASIC18.62■□□□□ 0.57
TRNP1Q6NT89 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.62■□□□□ 0.57
TRNP1Q6NT89 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 PP12613-201ENST00000424958 2230 ntBASIC18.62■□□□□ 0.57
TRNP1Q6NT89 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRNP1Q6NT89 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms