Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF220Q5VTB9 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF220Q5VTB9 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF220Q5VTB9 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
RNF220Q5VTB9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF220Q5VTB9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RNF220Q5VTB9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF220Q5VTB9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF220Q5VTB9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF220Q5VTB9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 MTMR9LP-203ENST00000426597 1545 ntBASIC17.32■□□□□ 0.36
RNF220Q5VTB9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 FSCN1P1-201ENST00000568912 1481 ntBASIC17.32■□□□□ 0.36
RNF220Q5VTB9 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 AC008040.2-201ENST00000461049 708 ntBASIC17.32■□□□□ 0.36
RNF220Q5VTB9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF220Q5VTB9 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 AL136379.1-201ENST00000623471 2642 ntBASIC17.31■□□□□ 0.36
RNF220Q5VTB9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.31■□□□□ 0.36
RNF220Q5VTB9 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 AC011506.1-201ENST00000474329 610 ntBASIC17.31■□□□□ 0.36
RNF220Q5VTB9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 PCDHA14-201ENST00000506751 2298 ntBASIC17.31■□□□□ 0.36
RNF220Q5VTB9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.31■□□□□ 0.36
RNF220Q5VTB9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RNF220Q5VTB9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.3■□□□□ 0.36
RNF220Q5VTB9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 MESTP1-201ENST00000404287 994 ntBASIC17.3■□□□□ 0.36
RNF220Q5VTB9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF220Q5VTB9 AC098590.1-201ENST00000468126 897 ntBASIC17.3■□□□□ 0.36
RNF220Q5VTB9 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms