Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RSPO1Q2MKA7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RSPO1Q2MKA7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RSPO1Q2MKA7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RSPO1Q2MKA7 AC139713.2-201ENST00000641328 2723 ntBASIC15.52■□□□□ 0.07
RSPO1Q2MKA7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 AC133963.1-201ENST00000504166 1679 ntBASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 DDX43P3-201ENST00000441064 443 ntBASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 RN7SL606P-201ENST00000472779 293 ntBASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 AC116407.2-201ENST00000613639 860 ntBASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RSPO1Q2MKA7 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 AL049597.2-201ENST00000565575 961 ntBASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 NTF6B-201ENST00000591913 560 ntBASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.5■□□□□ 0.07
RSPO1Q2MKA7 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 AC141586.5-201ENST00000624546 2050 ntBASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 TSPY22P-201ENST00000427496 604 ntBASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 FAM86EP-206ENST00000510506 987 ntBASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 AC011498.5-201ENST00000592027 486 ntBASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RSPO1Q2MKA7 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms