Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
UBA52P62987 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.51■□□□□ 0.07
UBA52P62987 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.51■□□□□ 0.07
UBA52P62987 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.51■□□□□ 0.07
UBA52P62987 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.51■□□□□ 0.07
UBA52P62987 AC141257.4-201ENST00000634557 245 ntBASIC15.51■□□□□ 0.07
UBA52P62987 AC136944.6-201ENST00000634818 245 ntBASIC15.51■□□□□ 0.07
UBA52P62987 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.51■□□□□ 0.07
UBA52P62987 AP000550.4-202ENST00000639755 178 ntBASIC15.51■□□□□ 0.07
UBA52P62987 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA52P62987 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA52P62987 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA52P62987 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA52P62987 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBA52P62987 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
UBA52P62987 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA52P62987 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
UBA52P62987 NKILA-202ENST00000614771 2598 ntBASIC15.51■□□□□ 0.07
UBA52P62987 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA52P62987 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.51■□□□□ 0.07
UBA52P62987 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA52P62987 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
UBA52P62987 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBA52P62987 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA52P62987 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA52P62987 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.51■□□□□ 0.07
UBA52P62987 ZNF815P-204ENST00000434898 1737 ntBASIC15.51■□□□□ 0.07
UBA52P62987 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA52P62987 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA52P62987 AC092338.2-201ENST00000568827 1415 ntBASIC15.51■□□□□ 0.07
UBA52P62987 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA52P62987 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.51■□□□□ 0.07
UBA52P62987 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBA52P62987 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.51■□□□□ 0.07
UBA52P62987 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.51■□□□□ 0.07
UBA52P62987 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
UBA52P62987 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBA52P62987 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
UBA52P62987 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
UBA52P62987 OR6D1P-203ENST00000641209 4860 ntBASIC15.5■□□□□ 0.07
UBA52P62987 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.5■□□□□ 0.07
UBA52P62987 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.5■□□□□ 0.07
UBA52P62987 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.5■□□□□ 0.07
UBA52P62987 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
UBA52P62987 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.5■□□□□ 0.07
UBA52P62987 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.5■□□□□ 0.07
UBA52P62987 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
UBA52P62987 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.5■□□□□ 0.07
UBA52P62987 TSPY17P-201ENST00000450329 467 ntBASIC15.5■□□□□ 0.07
UBA52P62987 AL512604.3-201ENST00000569583 964 ntBASIC15.5■□□□□ 0.07
UBA52P62987 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.5■□□□□ 0.07
UBA52P62987 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
UBA52P62987 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
UBA52P62987 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.5■□□□□ 0.07
UBA52P62987 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
UBA52P62987 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.5■□□□□ 0.07
UBA52P62987 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC15.5■□□□□ 0.07
UBA52P62987 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
UBA52P62987 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
UBA52P62987 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
UBA52P62987 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
UBA52P62987 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.49■□□□□ 0.07
UBA52P62987 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UBA52P62987 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.49■□□□□ 0.07
UBA52P62987 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
UBA52P62987 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.49■□□□□ 0.07
UBA52P62987 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
UBA52P62987 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UBA52P62987 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.49■□□□□ 0.07
UBA52P62987 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UBA52P62987 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UBA52P62987 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
UBA52P62987 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UBA52P62987 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.49■□□□□ 0.07
UBA52P62987 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
UBA52P62987 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
UBA52P62987 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.49■□□□□ 0.07
UBA52P62987 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UBA52P62987 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.49■□□□□ 0.07
UBA52P62987 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms