Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDE1AP54750 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PDE1AP54750 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDE1AP54750 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PDE1AP54750 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
PDE1AP54750 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.9■■□□□ 1.1
PDE1AP54750 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
PDE1AP54750 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PDE1AP54750 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDE1AP54750 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
PDE1AP54750 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.89■■□□□ 1.09
PDE1AP54750 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PDE1AP54750 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC21.89■■□□□ 1.09
PDE1AP54750 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.89■■□□□ 1.09
PDE1AP54750 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDE1AP54750 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDE1AP54750 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
PDE1AP54750 FAM86EP-206ENST00000510506 987 ntBASIC21.89■■□□□ 1.09
PDE1AP54750 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.89■■□□□ 1.09
PDE1AP54750 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.89■■□□□ 1.09
PDE1AP54750 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.89■■□□□ 1.09
PDE1AP54750 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.89■■□□□ 1.09
PDE1AP54750 AC011498.5-201ENST00000592027 486 ntBASIC21.89■■□□□ 1.09
PDE1AP54750 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
PDE1AP54750 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDE1AP54750 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21.89■■□□□ 1.09
PDE1AP54750 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.89■■□□□ 1.09
PDE1AP54750 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.89■■□□□ 1.09
PDE1AP54750 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PDE1AP54750 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PDE1AP54750 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.88■■□□□ 1.09
PDE1AP54750 REXO1L11P-201ENST00000620964 1927 ntBASIC21.88■■□□□ 1.09
PDE1AP54750 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.88■■□□□ 1.09
PDE1AP54750 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.88■■□□□ 1.09
PDE1AP54750 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 AC005332.1-201ENST00000577698 1310 ntBASIC21.88■■□□□ 1.09
PDE1AP54750 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.88■■□□□ 1.09
PDE1AP54750 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.88■■□□□ 1.09
PDE1AP54750 TSPY22P-201ENST00000427496 604 ntBASIC21.88■■□□□ 1.09
PDE1AP54750 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.88■■□□□ 1.09
PDE1AP54750 RN7SL606P-201ENST00000472779 293 ntBASIC21.88■■□□□ 1.09
PDE1AP54750 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.88■■□□□ 1.09
PDE1AP54750 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
PDE1AP54750 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
PDE1AP54750 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
PDE1AP54750 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.88■■□□□ 1.09
PDE1AP54750 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.88■■□□□ 1.09
PDE1AP54750 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PDE1AP54750 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PDE1AP54750 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDE1AP54750 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC21.87■■□□□ 1.09
PDE1AP54750 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.87■■□□□ 1.09
PDE1AP54750 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PDE1AP54750 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDE1AP54750 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.87■■□□□ 1.09
PDE1AP54750 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.87■■□□□ 1.09
PDE1AP54750 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.87■■□□□ 1.09
PDE1AP54750 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.87■■□□□ 1.09
PDE1AP54750 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.87■■□□□ 1.09
PDE1AP54750 AC116407.2-201ENST00000613639 860 ntBASIC21.87■■□□□ 1.09
PDE1AP54750 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
PDE1AP54750 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
PDE1AP54750 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PDE1AP54750 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PDE1AP54750 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDE1AP54750 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDE1AP54750 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC21.87■■□□□ 1.09
PDE1AP54750 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDE1AP54750 PP12613-201ENST00000424958 2230 ntBASIC21.87■■□□□ 1.09
PDE1AP54750 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PDE1AP54750 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PDE1AP54750 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDE1AP54750 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDE1AP54750 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PDE1AP54750 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDE1AP54750 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDE1AP54750 LINC00304-203ENST00000565008 1864 ntBASIC21.86■■□□□ 1.09
PDE1AP54750 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PDE1AP54750 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PDE1AP54750 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.86■■□□□ 1.09
PDE1AP54750 DDX43P3-201ENST00000441064 443 ntBASIC21.86■■□□□ 1.09
PDE1AP54750 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PDE1AP54750 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.86■■□□□ 1.09
PDE1AP54750 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC21.86■■□□□ 1.09
PDE1AP54750 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms