Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSR1P43307 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.1■□□□□ 0.65
SSR1P43307 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
SSR1P43307 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.1■□□□□ 0.65
SSR1P43307 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.1■□□□□ 0.65
SSR1P43307 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.1■□□□□ 0.65
SSR1P43307 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SSR1P43307 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.1■□□□□ 0.65
SSR1P43307 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
SSR1P43307 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SSR1P43307 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.1■□□□□ 0.65
SSR1P43307 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.1■□□□□ 0.65
SSR1P43307 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC19.1■□□□□ 0.65
SSR1P43307 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SSR1P43307 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SSR1P43307 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.1■□□□□ 0.65
SSR1P43307 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.09■□□□□ 0.65
SSR1P43307 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.09■□□□□ 0.65
SSR1P43307 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.09■□□□□ 0.65
SSR1P43307 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
SSR1P43307 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SSR1P43307 KRT18P22-201ENST00000402024 1347 ntBASIC19.09■□□□□ 0.65
SSR1P43307 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SSR1P43307 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.09■□□□□ 0.65
SSR1P43307 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.09■□□□□ 0.65
SSR1P43307 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.09■□□□□ 0.65
SSR1P43307 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.09■□□□□ 0.65
SSR1P43307 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.09■□□□□ 0.65
SSR1P43307 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.09■□□□□ 0.65
SSR1P43307 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SSR1P43307 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.09■□□□□ 0.65
SSR1P43307 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SSR1P43307 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SSR1P43307 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.09■□□□□ 0.65
SSR1P43307 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.09■□□□□ 0.65
SSR1P43307 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SSR1P43307 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.09■□□□□ 0.65
SSR1P43307 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSR1P43307 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSR1P43307 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.08■□□□□ 0.65
SSR1P43307 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSR1P43307 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSR1P43307 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
SSR1P43307 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSR1P43307 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSR1P43307 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SSR1P43307 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.08■□□□□ 0.64
SSR1P43307 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
SSR1P43307 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.08■□□□□ 0.64
SSR1P43307 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.08■□□□□ 0.64
SSR1P43307 SEC1P-202ENST00000473944 940 ntBASIC19.08■□□□□ 0.64
SSR1P43307 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.08■□□□□ 0.64
SSR1P43307 MIR3180-4-201ENST00000582223 153 ntBASIC19.08■□□□□ 0.64
SSR1P43307 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SSR1P43307 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.08■□□□□ 0.64
SSR1P43307 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms