Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2AP42771 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2AP42771 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKN2AP42771 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.03■□□□□ 0.16
CDKN2AP42771 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
CDKN2AP42771 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2AP42771 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2AP42771 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKN2AP42771 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2AP42771 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.03■□□□□ 0.16
CDKN2AP42771 AC113404.2-201ENST00000507884 177 ntBASIC16.03■□□□□ 0.16
CDKN2AP42771 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.03■□□□□ 0.16
CDKN2AP42771 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKN2AP42771 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.03■□□□□ 0.16
CDKN2AP42771 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.03■□□□□ 0.16
CDKN2AP42771 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.03■□□□□ 0.16
CDKN2AP42771 AC066615.1-201ENST00000640911 628 ntBASIC16.03■□□□□ 0.16
CDKN2AP42771 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2AP42771 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2AP42771 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2AP42771 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2AP42771 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDKN2AP42771 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CDKN2AP42771 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2AP42771 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2AP42771 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2AP42771 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.03■□□□□ 0.16
CDKN2AP42771 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2AP42771 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDKN2AP42771 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.02■□□□□ 0.16
CDKN2AP42771 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2AP42771 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2AP42771 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2AP42771 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CDKN2AP42771 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2AP42771 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2AP42771 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2AP42771 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2AP42771 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.02■□□□□ 0.16
CDKN2AP42771 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.02■□□□□ 0.16
CDKN2AP42771 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2AP42771 SLC25A3P1-201ENST00000443844 931 ntBASIC16.02■□□□□ 0.16
CDKN2AP42771 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.02■□□□□ 0.16
CDKN2AP42771 AC034232.1-201ENST00000506026 1064 ntBASIC16.02■□□□□ 0.16
CDKN2AP42771 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.02■□□□□ 0.16
CDKN2AP42771 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.02■□□□□ 0.16
CDKN2AP42771 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.02■□□□□ 0.16
CDKN2AP42771 AC024563.2-201ENST00000603282 481 ntBASIC16.02■□□□□ 0.16
CDKN2AP42771 AC079602.3-201ENST00000623931 403 ntBASIC16.02■□□□□ 0.16
CDKN2AP42771 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDKN2AP42771 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.02■□□□□ 0.16
CDKN2AP42771 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDKN2AP42771 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDKN2AP42771 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDKN2AP42771 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDKN2AP42771 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDKN2AP42771 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDKN2AP42771 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDKN2AP42771 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.02■□□□□ 0.15
CDKN2AP42771 AC106820.2-201ENST00000563775 3264 ntBASIC16.02■□□□□ 0.15
CDKN2AP42771 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDKN2AP42771 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CDKN2AP42771 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.01■□□□□ 0.15
CDKN2AP42771 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKN2AP42771 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.01■□□□□ 0.15
CDKN2AP42771 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDKN2AP42771 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.01■□□□□ 0.15
CDKN2AP42771 SIRPAP1-201ENST00000448467 1770 ntBASIC16.01■□□□□ 0.15
CDKN2AP42771 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKN2AP42771 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKN2AP42771 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKN2AP42771 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CDKN2AP42771 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKN2AP42771 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CDKN2AP42771 RASA4DP-201ENST00000460726 1199 ntBASIC16.01■□□□□ 0.15
CDKN2AP42771 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.01■□□□□ 0.15
CDKN2AP42771 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDKN2AP42771 AC010203.1-204ENST00000548782 407 ntBASIC16.01■□□□□ 0.15
CDKN2AP42771 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.01■□□□□ 0.15
CDKN2AP42771 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.01■□□□□ 0.15
CDKN2AP42771 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.01■□□□□ 0.15
CDKN2AP42771 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CDKN2AP42771 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDKN2AP42771 AC140113.3-201ENST00000605663 199 ntBASIC16.01■□□□□ 0.15
CDKN2AP42771 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDKN2AP42771 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKN2AP42771 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.01■□□□□ 0.15
CDKN2AP42771 AC012313.1-201ENST00000593393 3059 ntBASIC16.01■□□□□ 0.15
CDKN2AP42771 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CDKN2AP42771 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKN2AP42771 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.01■□□□□ 0.15
CDKN2AP42771 AC133963.1-201ENST00000504166 1679 ntBASIC16.01■□□□□ 0.15
CDKN2AP42771 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.01■□□□□ 0.15
CDKN2AP42771 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDKN2AP42771 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDKN2AP42771 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDKN2AP42771 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16■□□□□ 0.15
CDKN2AP42771 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CDKN2AP42771 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CDKN2AP42771 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms