Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA6P31267 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA6P31267 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA6P31267 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA6P31267 AP002414.1-201ENST00000391405 1147 ntBASIC17.61■□□□□ 0.41
HOXA6P31267 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA6P31267 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.61■□□□□ 0.41
HOXA6P31267 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA6P31267 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA6P31267 AC074386.1-202ENST00000463561 864 ntBASIC17.61■□□□□ 0.41
HOXA6P31267 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.61■□□□□ 0.41
HOXA6P31267 AL513210.1-201ENST00000629608 234 ntBASIC17.61■□□□□ 0.41
HOXA6P31267 AC010507.1-201ENST00000633895 436 ntBASIC17.61■□□□□ 0.41
HOXA6P31267 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA6P31267 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA6P31267 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA6P31267 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HOXA6P31267 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA6P31267 AC007952.6-201ENST00000573168 2673 ntBASIC17.61■□□□□ 0.41
HOXA6P31267 AC003957.1-201ENST00000625108 2673 ntBASIC17.61■□□□□ 0.41
HOXA6P31267 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA6P31267 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.61■□□□□ 0.41
HOXA6P31267 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA6P31267 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HOXA6P31267 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HOXA6P31267 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HOXA6P31267 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA6P31267 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA6P31267 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA6P31267 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
HOXA6P31267 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.6■□□□□ 0.41
HOXA6P31267 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA6P31267 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA6P31267 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA6P31267 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA6P31267 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA6P31267 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HOXA6P31267 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
HOXA6P31267 KLF4P1-201ENST00000412782 1185 ntBASIC17.6■□□□□ 0.41
HOXA6P31267 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.6■□□□□ 0.41
HOXA6P31267 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.6■□□□□ 0.41
HOXA6P31267 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA6P31267 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.6■□□□□ 0.41
HOXA6P31267 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.6■□□□□ 0.41
HOXA6P31267 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.6■□□□□ 0.41
HOXA6P31267 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.6■□□□□ 0.41
HOXA6P31267 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA6P31267 AC004835.2-201ENST00000603762 682 ntBASIC17.6■□□□□ 0.41
HOXA6P31267 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.6■□□□□ 0.41
HOXA6P31267 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA6P31267 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA6P31267 AC148477.5-201ENST00000625164 1645 ntBASIC17.6■□□□□ 0.41
HOXA6P31267 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA6P31267 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.6■□□□□ 0.41
HOXA6P31267 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.6■□□□□ 0.41
HOXA6P31267 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA6P31267 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.6■□□□□ 0.41
HOXA6P31267 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA6P31267 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HOXA6P31267 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA6P31267 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.59■□□□□ 0.41
HOXA6P31267 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA6P31267 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA6P31267 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.59■□□□□ 0.41
HOXA6P31267 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA6P31267 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HOXA6P31267 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA6P31267 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA6P31267 AC093010.1-201ENST00000473625 1624 ntBASIC17.59■□□□□ 0.41
HOXA6P31267 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA6P31267 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.59■□□□□ 0.41
HOXA6P31267 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA6P31267 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA6P31267 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA6P31267 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA6P31267 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HOXA6P31267 AL139400.1-201ENST00000366220 510 ntBASIC17.59■□□□□ 0.41
HOXA6P31267 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.59■□□□□ 0.41
HOXA6P31267 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.59■□□□□ 0.41
HOXA6P31267 COX20P2-201ENST00000452636 358 ntBASIC17.59■□□□□ 0.41
HOXA6P31267 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.59■□□□□ 0.41
HOXA6P31267 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA6P31267 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA6P31267 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.59■□□□□ 0.41
HOXA6P31267 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXA6P31267 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.59■□□□□ 0.41
HOXA6P31267 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.59■□□□□ 0.41
HOXA6P31267 AC093028.1-201ENST00000622998 982 ntBASIC17.59■□□□□ 0.41
HOXA6P31267 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HOXA6P31267 AC007064.4-201ENST00000637740 555 ntBASIC17.59■□□□□ 0.41
HOXA6P31267 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA6P31267 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HOXA6P31267 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA6P31267 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXA6P31267 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HOXA6P31267 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.58■□□□□ 0.41
HOXA6P31267 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HOXA6P31267 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HOXA6P31267 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.58■□□□□ 0.41
HOXA6P31267 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms