Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MMP8P22894 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.87■□□□□ 0.61
MMP8P22894 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.87■□□□□ 0.61
MMP8P22894 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP8P22894 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
MMP8P22894 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP8P22894 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
MMP8P22894 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
MMP8P22894 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
MMP8P22894 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
MMP8P22894 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.86■□□□□ 0.61
MMP8P22894 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
MMP8P22894 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.86■□□□□ 0.61
MMP8P22894 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
MMP8P22894 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
MMP8P22894 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.86■□□□□ 0.61
MMP8P22894 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.86■□□□□ 0.61
MMP8P22894 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
MMP8P22894 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
MMP8P22894 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.86■□□□□ 0.61
MMP8P22894 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
MMP8P22894 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.86■□□□□ 0.61
MMP8P22894 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
MMP8P22894 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MMP8P22894 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.85■□□□□ 0.61
MMP8P22894 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MMP8P22894 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP8P22894 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP8P22894 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MMP8P22894 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP8P22894 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
MMP8P22894 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MMP8P22894 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.85■□□□□ 0.61
MMP8P22894 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
MMP8P22894 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
MMP8P22894 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.85■□□□□ 0.61
MMP8P22894 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP8P22894 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP8P22894 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP8P22894 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.85■□□□□ 0.61
MMP8P22894 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.85■□□□□ 0.61
MMP8P22894 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
MMP8P22894 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MMP8P22894 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MMP8P22894 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.85■□□□□ 0.61
MMP8P22894 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.85■□□□□ 0.61
MMP8P22894 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.85■□□□□ 0.61
MMP8P22894 NTF6B-201ENST00000591913 560 ntBASIC18.85■□□□□ 0.61
MMP8P22894 AC011498.5-201ENST00000592027 486 ntBASIC18.85■□□□□ 0.61
MMP8P22894 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.85■□□□□ 0.61
MMP8P22894 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.85■□□□□ 0.61
MMP8P22894 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MMP8P22894 AL121956.5-201ENST00000625261 221 ntBASIC18.85■□□□□ 0.61
MMP8P22894 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
MMP8P22894 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MMP8P22894 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MMP8P22894 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.85■□□□□ 0.61
MMP8P22894 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
MMP8P22894 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.84■□□□□ 0.61
MMP8P22894 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.84■□□□□ 0.61
MMP8P22894 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.84■□□□□ 0.61
MMP8P22894 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.84■□□□□ 0.61
MMP8P22894 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.84■□□□□ 0.61
MMP8P22894 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
MMP8P22894 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
MMP8P22894 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MMP8P22894 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms