Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCG2P13521 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.64■□□□□ 0.89
SCG2P13521 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCG2P13521 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.64■□□□□ 0.89
SCG2P13521 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.63■□□□□ 0.89
SCG2P13521 AC233702.3-201ENST00000578656 1387 ntBASIC20.63■□□□□ 0.89
SCG2P13521 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCG2P13521 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SCG2P13521 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCG2P13521 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SCG2P13521 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCG2P13521 DUSP5P1-201ENST00000441325 1139 ntBASIC20.63■□□□□ 0.89
SCG2P13521 TOB2P1-201ENST00000469761 992 ntBASIC20.63■□□□□ 0.89
SCG2P13521 AP005901.3-202ENST00000581653 237 ntBASIC20.63■□□□□ 0.89
SCG2P13521 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.63■□□□□ 0.89
SCG2P13521 AC005336.2-201ENST00000593183 939 ntBASIC20.63■□□□□ 0.89
SCG2P13521 AL121894.2-201ENST00000602977 491 ntBASIC20.63■□□□□ 0.89
SCG2P13521 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.63■□□□□ 0.89
SCG2P13521 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCG2P13521 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCG2P13521 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC20.63■□□□□ 0.89
SCG2P13521 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SCG2P13521 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.63■□□□□ 0.89
SCG2P13521 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.63■□□□□ 0.89
SCG2P13521 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCG2P13521 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCG2P13521 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SCG2P13521 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCG2P13521 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCG2P13521 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.62■□□□□ 0.89
SCG2P13521 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SCG2P13521 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
SCG2P13521 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
SCG2P13521 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.62■□□□□ 0.89
SCG2P13521 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.62■□□□□ 0.89
SCG2P13521 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
SCG2P13521 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.62■□□□□ 0.89
SCG2P13521 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.62■□□□□ 0.89
SCG2P13521 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SCG2P13521 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.62■□□□□ 0.89
SCG2P13521 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SCG2P13521 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
SCG2P13521 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SCG2P13521 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.62■□□□□ 0.89
SCG2P13521 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCG2P13521 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SCG2P13521 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SCG2P13521 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.61■□□□□ 0.89
SCG2P13521 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SCG2P13521 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
SCG2P13521 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
SCG2P13521 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
SCG2P13521 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCG2P13521 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCG2P13521 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCG2P13521 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCG2P13521 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SCG2P13521 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.61■□□□□ 0.89
SCG2P13521 LINC00265-3P-201ENST00000447588 903 ntBASIC20.61■□□□□ 0.89
SCG2P13521 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.61■□□□□ 0.89
SCG2P13521 AC092329.2-201ENST00000598402 547 ntBASIC20.61■□□□□ 0.89
SCG2P13521 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.61■□□□□ 0.89
SCG2P13521 AC009949.1-201ENST00000623048 1830 ntBASIC20.61■□□□□ 0.89
SCG2P13521 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.61■□□□□ 0.89
SCG2P13521 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCG2P13521 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC20.61■□□□□ 0.89
SCG2P13521 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCG2P13521 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCG2P13521 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCG2P13521 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCG2P13521 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCG2P13521 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.61■□□□□ 0.89
SCG2P13521 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.6■□□□□ 0.89
SCG2P13521 AL133373.2-201ENST00000623187 2828 ntBASIC20.6■□□□□ 0.89
SCG2P13521 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCG2P13521 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCG2P13521 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SCG2P13521 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SCG2P13521 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.6■□□□□ 0.89
SCG2P13521 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms