Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL1A2P08123 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL1A2P08123 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL1A2P08123 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL1A2P08123 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL1A2P08123 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
COL1A2P08123 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL1A2P08123 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL1A2P08123 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL1A2P08123 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL1A2P08123 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.6■□□□□ 0.73
COL1A2P08123 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COL1A2P08123 SPDYE21P-201ENST00000413323 827 ntBASIC19.6■□□□□ 0.73
COL1A2P08123 PMS2P1-201ENST00000431037 1228 ntBASIC19.6■□□□□ 0.73
COL1A2P08123 SLC25A1P1-201ENST00000528351 927 ntBASIC19.6■□□□□ 0.73
COL1A2P08123 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.6■□□□□ 0.73
COL1A2P08123 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.6■□□□□ 0.73
COL1A2P08123 AC008735.5-201ENST00000623544 497 ntBASIC19.6■□□□□ 0.73
COL1A2P08123 AC116407.3-201ENST00000623905 1129 ntBASIC19.6■□□□□ 0.73
COL1A2P08123 AC073592.5-201ENST00000624854 528 ntBASIC19.6■□□□□ 0.73
COL1A2P08123 AL022326.1-202ENST00000641533 845 ntBASIC19.6■□□□□ 0.73
COL1A2P08123 AF228730.7-201ENST00000641842 219 ntBASIC19.6■□□□□ 0.73
COL1A2P08123 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
COL1A2P08123 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.6■□□□□ 0.73
COL1A2P08123 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL1A2P08123 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL1A2P08123 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
COL1A2P08123 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
COL1A2P08123 HLA-J-201ENST00000462773 1622 ntBASIC19.6■□□□□ 0.73
COL1A2P08123 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL1A2P08123 BX276092.7-203ENST00000637198 1536 ntBASIC19.6■□□□□ 0.73
COL1A2P08123 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL1A2P08123 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
COL1A2P08123 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
COL1A2P08123 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL1A2P08123 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL1A2P08123 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
COL1A2P08123 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.59■□□□□ 0.73
COL1A2P08123 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL1A2P08123 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.59■□□□□ 0.73
COL1A2P08123 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.59■□□□□ 0.73
COL1A2P08123 LAGE3P1-201ENST00000425356 484 ntBASIC19.59■□□□□ 0.73
COL1A2P08123 PRYP5-201ENST00000451909 266 ntBASIC19.59■□□□□ 0.73
COL1A2P08123 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.59■□□□□ 0.73
COL1A2P08123 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.59■□□□□ 0.73
COL1A2P08123 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.59■□□□□ 0.73
COL1A2P08123 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL1A2P08123 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.59■□□□□ 0.73
COL1A2P08123 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL1A2P08123 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL1A2P08123 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.59■□□□□ 0.73
COL1A2P08123 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL1A2P08123 AC100803.2-201ENST00000562459 1963 ntBASIC19.59■□□□□ 0.73
COL1A2P08123 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.59■□□□□ 0.73
COL1A2P08123 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.59■□□□□ 0.73
COL1A2P08123 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL1A2P08123 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.59■□□□□ 0.73
COL1A2P08123 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.59■□□□□ 0.73
COL1A2P08123 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COL1A2P08123 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.58■□□□□ 0.73
COL1A2P08123 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
COL1A2P08123 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
COL1A2P08123 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.58■□□□□ 0.73
COL1A2P08123 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.58■□□□□ 0.73
COL1A2P08123 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.58■□□□□ 0.73
COL1A2P08123 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.58■□□□□ 0.73
COL1A2P08123 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.58■□□□□ 0.73
COL1A2P08123 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.58■□□□□ 0.73
COL1A2P08123 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.58■□□□□ 0.73
COL1A2P08123 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.58■□□□□ 0.73
COL1A2P08123 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COL1A2P08123 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
COL1A2P08123 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
COL1A2P08123 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COL1A2P08123 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
COL1A2P08123 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL1A2P08123 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL1A2P08123 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
COL1A2P08123 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL1A2P08123 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL1A2P08123 AL049757.1-201ENST00000616842 1596 ntBASIC19.58■□□□□ 0.72
COL1A2P08123 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.58■□□□□ 0.72
COL1A2P08123 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL1A2P08123 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.58■□□□□ 0.72
COL1A2P08123 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.57■□□□□ 0.72
COL1A2P08123 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
COL1A2P08123 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.57■□□□□ 0.72
COL1A2P08123 BX005266.1-201ENST00000473402 457 ntBASIC19.57■□□□□ 0.72
COL1A2P08123 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A2P08123 IGHV3-22-201ENST00000520721 359 ntBASIC19.57■□□□□ 0.72
COL1A2P08123 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.57■□□□□ 0.72
COL1A2P08123 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.57■□□□□ 0.72
COL1A2P08123 AC106730.1-201ENST00000566722 1090 ntBASIC19.57■□□□□ 0.72
COL1A2P08123 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A2P08123 AC019129.2-201ENST00000609837 1235 ntBASIC19.57■□□□□ 0.72
COL1A2P08123 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.57■□□□□ 0.72
COL1A2P08123 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A2P08123 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A2P08123 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL1A2P08123 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms