Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
APPP05067 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
APPP05067 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
APPP05067 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APPP05067 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.51■■□□□ 1.03
APPP05067 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APPP05067 AC233702.3-201ENST00000578656 1387 ntBASIC21.51■■□□□ 1.03
APPP05067 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
APPP05067 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APPP05067 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.51■■□□□ 1.03
APPP05067 VENTXP7-201ENST00000475503 772 ntBASIC21.51■■□□□ 1.03
APPP05067 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC21.51■■□□□ 1.03
APPP05067 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
APPP05067 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.51■■□□□ 1.03
APPP05067 MIR3652-201ENST00000579335 131 ntBASIC21.51■■□□□ 1.03
APPP05067 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
APPP05067 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
APPP05067 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APPP05067 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APPP05067 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APPP05067 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APPP05067 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC21.51■■□□□ 1.03
APPP05067 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
APPP05067 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.51■■□□□ 1.03
APPP05067 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.51■■□□□ 1.03
APPP05067 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
APPP05067 ABALON-201ENST00000629058 1903 ntBASIC21.51■■□□□ 1.03
APPP05067 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
APPP05067 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.5■■□□□ 1.03
APPP05067 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
APPP05067 AC091607.1-201ENST00000490318 1060 ntBASIC21.5■■□□□ 1.03
APPP05067 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.5■■□□□ 1.03
APPP05067 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.5■■□□□ 1.03
APPP05067 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
APPP05067 AC074051.2-201ENST00000565115 352 ntBASIC21.5■■□□□ 1.03
APPP05067 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
APPP05067 Z69720.1-201ENST00000601483 472 ntBASIC21.5■■□□□ 1.03
APPP05067 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC21.5■■□□□ 1.03
APPP05067 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
APPP05067 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
APPP05067 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APPP05067 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
APPP05067 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.49■■□□□ 1.03
APPP05067 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.49■■□□□ 1.03
APPP05067 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
APPP05067 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APPP05067 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
APPP05067 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APPP05067 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
APPP05067 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
APPP05067 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.49■■□□□ 1.03
APPP05067 AL845331.1-201ENST00000424978 1190 ntBASIC21.49■■□□□ 1.03
APPP05067 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC21.49■■□□□ 1.03
APPP05067 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.49■■□□□ 1.03
APPP05067 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.49■■□□□ 1.03
APPP05067 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
APPP05067 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.49■■□□□ 1.03
APPP05067 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
APPP05067 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
APPP05067 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
APPP05067 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.49■■□□□ 1.03
APPP05067 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
APPP05067 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.49■■□□□ 1.03
APPP05067 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APPP05067 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC21.49■■□□□ 1.03
APPP05067 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.49■■□□□ 1.03
APPP05067 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
APPP05067 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
APPP05067 AP000997.3-201ENST00000623333 2250 ntBASIC21.49■■□□□ 1.03
APPP05067 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
APPP05067 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
APPP05067 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC21.49■■□□□ 1.03
APPP05067 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC21.49■■□□□ 1.03
APPP05067 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
APPP05067 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
APPP05067 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
APPP05067 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
APPP05067 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.48■■□□□ 1.03
APPP05067 AC135050.7-201ENST00000624508 2218 ntBASIC21.48■■□□□ 1.03
APPP05067 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.48■■□□□ 1.03
APPP05067 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
APPP05067 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
APPP05067 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms