Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LCATP04180 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LCATP04180 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LCATP04180 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LCATP04180 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LCATP04180 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LCATP04180 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
LCATP04180 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LCATP04180 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LCATP04180 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
LCATP04180 LTB4R2-202ENST00000528054 3092 ntBASIC15.71■□□□□ 0.11
LCATP04180 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
LCATP04180 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 FAM8A6P-201ENST00000407496 1135 ntBASIC15.71■□□□□ 0.11
LCATP04180 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.71■□□□□ 0.11
LCATP04180 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.71■□□□□ 0.11
LCATP04180 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.71■□□□□ 0.11
LCATP04180 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 AC024563.2-201ENST00000603282 481 ntBASIC15.71■□□□□ 0.11
LCATP04180 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.71■□□□□ 0.11
LCATP04180 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.71■□□□□ 0.11
LCATP04180 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LCATP04180 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LCATP04180 AC134043.2-201ENST00000624206 2238 ntBASIC15.71■□□□□ 0.1
LCATP04180 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.71■□□□□ 0.1
LCATP04180 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LCATP04180 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LCATP04180 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
LCATP04180 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LCATP04180 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.7■□□□□ 0.1
LCATP04180 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.7■□□□□ 0.1
LCATP04180 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.7■□□□□ 0.1
LCATP04180 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.7■□□□□ 0.1
LCATP04180 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.7■□□□□ 0.1
LCATP04180 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 AL391807.1-203ENST00000604392 2365 ntBASIC15.7■□□□□ 0.1
LCATP04180 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LCATP04180 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LCATP04180 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.7■□□□□ 0.1
LCATP04180 RNF152P1-201ENST00000397754 604 ntBASIC15.7■□□□□ 0.1
LCATP04180 STARP1-201ENST00000397973 869 ntBASIC15.7■□□□□ 0.1
LCATP04180 AK4P3-201ENST00000418260 669 ntBASIC15.7■□□□□ 0.1
LCATP04180 TSPY5P-201ENST00000426936 936 ntBASIC15.7■□□□□ 0.1
LCATP04180 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.7■□□□□ 0.1
LCATP04180 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.7■□□□□ 0.1
LCATP04180 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.7■□□□□ 0.1
LCATP04180 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.7■□□□□ 0.1
LCATP04180 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.7■□□□□ 0.1
LCATP04180 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LCATP04180 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.7■□□□□ 0.1
LCATP04180 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.7■□□□□ 0.1
LCATP04180 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
LCATP04180 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LCATP04180 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LCATP04180 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LCATP04180 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LCATP04180 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LCATP04180 LINC00602-201ENST00000629776 2065 ntBASIC15.69■□□□□ 0.1
LCATP04180 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LCATP04180 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LCATP04180 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
LCATP04180 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LCATP04180 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LCATP04180 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms