Protein–RNA interactions for Protein: P02743

APCS, Serum amyloid P-component, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCSP02743 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
APCSP02743 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
APCSP02743 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.53□□□□□ -0.24
APCSP02743 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
APCSP02743 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APCSP02743 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
APCSP02743 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APCSP02743 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
APCSP02743 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
APCSP02743 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
APCSP02743 AL355312.1-201ENST00000407115 2176 ntBASIC13.52□□□□□ -0.24
APCSP02743 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
APCSP02743 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
APCSP02743 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.52□□□□□ -0.24
APCSP02743 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.52□□□□□ -0.24
APCSP02743 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
APCSP02743 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.24
APCSP02743 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.52□□□□□ -0.24
APCSP02743 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
APCSP02743 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
APCSP02743 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
APCSP02743 AC093787.1-201ENST00000450396 207 ntBASIC13.52□□□□□ -0.25
APCSP02743 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APCSP02743 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APCSP02743 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.52□□□□□ -0.25
APCSP02743 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC13.52□□□□□ -0.25
APCSP02743 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
APCSP02743 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APCSP02743 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APCSP02743 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
APCSP02743 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.52□□□□□ -0.25
APCSP02743 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APCSP02743 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC13.52□□□□□ -0.25
APCSP02743 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
APCSP02743 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
APCSP02743 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
APCSP02743 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APCSP02743 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APCSP02743 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APCSP02743 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
APCSP02743 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
APCSP02743 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
APCSP02743 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.52□□□□□ -0.25
APCSP02743 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.52□□□□□ -0.25
APCSP02743 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.52□□□□□ -0.25
APCSP02743 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
APCSP02743 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
APCSP02743 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
APCSP02743 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.52□□□□□ -0.25
APCSP02743 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.51□□□□□ -0.25
APCSP02743 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.51□□□□□ -0.25
APCSP02743 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 KRT8P32-201ENST00000512863 1461 ntBASIC13.51□□□□□ -0.25
APCSP02743 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APCSP02743 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.51□□□□□ -0.25
APCSP02743 RER1-204ENST00000378518 522 ntTSL 3 BASIC13.51□□□□□ -0.25
APCSP02743 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.51□□□□□ -0.25
APCSP02743 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
APCSP02743 AC006015.1-201ENST00000429970 570 ntBASIC13.51□□□□□ -0.25
APCSP02743 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
APCSP02743 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.51□□□□□ -0.25
APCSP02743 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.51□□□□□ -0.25
APCSP02743 AC087623.3-201ENST00000607047 1098 ntBASIC13.51□□□□□ -0.25
APCSP02743 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
APCSP02743 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.51□□□□□ -0.25
APCSP02743 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
APCSP02743 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
APCSP02743 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
APCSP02743 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.51□□□□□ -0.25
APCSP02743 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.51□□□□□ -0.25
APCSP02743 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APCSP02743 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
APCSP02743 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APCSP02743 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
APCSP02743 PHGDH-209ENST00000641074 1780 ntBASIC13.5□□□□□ -0.25
APCSP02743 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.5□□□□□ -0.25
APCSP02743 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APCSP02743 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
APCSP02743 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APCSP02743 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APCSP02743 HYMAI-201ENST00000635591 3347 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms