Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
MBD4O95243 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
MBD4O95243 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MBD4O95243 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.37■■□□□ 1.01
MBD4O95243 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.37■■□□□ 1.01
MBD4O95243 AC096633.1-201ENST00000422446 749 ntBASIC21.37■■□□□ 1.01
MBD4O95243 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.37■■□□□ 1.01
MBD4O95243 DANCR-204ENST00000444958 709 ntTSL 3 BASIC21.37■■□□□ 1.01
MBD4O95243 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MBD4O95243 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.37■■□□□ 1.01
MBD4O95243 LINC01711-201ENST00000598340 967 ntBASIC21.37■■□□□ 1.01
MBD4O95243 FLJ13224-201ENST00000313737 1514 ntBASIC21.37■■□□□ 1.01
MBD4O95243 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
MBD4O95243 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC21.37■■□□□ 1.01
MBD4O95243 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.37■■□□□ 1.01
MBD4O95243 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC21.37■■□□□ 1.01
MBD4O95243 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.37■■□□□ 1.01
MBD4O95243 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC21.37■■□□□ 1.01
MBD4O95243 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.37■■□□□ 1.01
MBD4O95243 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MBD4O95243 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
MBD4O95243 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.36■■□□□ 1.01
MBD4O95243 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
MBD4O95243 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 TBC1D3P5-201ENST00000579401 1545 ntBASIC21.36■■□□□ 1.01
MBD4O95243 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC21.36■■□□□ 1.01
MBD4O95243 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 AC004870.1-201ENST00000315132 882 ntBASIC21.36■■□□□ 1.01
MBD4O95243 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.36■■□□□ 1.01
MBD4O95243 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.36■■□□□ 1.01
MBD4O95243 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.36■■□□□ 1.01
MBD4O95243 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.36■■□□□ 1.01
MBD4O95243 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.36■■□□□ 1.01
MBD4O95243 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 AC138028.4-201ENST00000564984 1845 ntBASIC21.36■■□□□ 1.01
MBD4O95243 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC21.36■■□□□ 1.01
MBD4O95243 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.36■■□□□ 1.01
MBD4O95243 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
MBD4O95243 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
MBD4O95243 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.35■■□□□ 1.01
MBD4O95243 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
MBD4O95243 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 AC097374.2-201ENST00000618617 1306 ntBASIC21.35■■□□□ 1.01
MBD4O95243 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.35■■□□□ 1.01
MBD4O95243 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
MBD4O95243 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.35■■□□□ 1.01
MBD4O95243 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
MBD4O95243 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.35■■□□□ 1.01
MBD4O95243 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.35■■□□□ 1.01
MBD4O95243 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
MBD4O95243 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.35■■□□□ 1.01
MBD4O95243 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.35■■□□□ 1.01
MBD4O95243 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.35■■□□□ 1.01
MBD4O95243 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
MBD4O95243 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 REXO1L6P-202ENST00000619970 1078 ntBASIC21.35■■□□□ 1.01
MBD4O95243 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC21.35■■□□□ 1.01
MBD4O95243 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
MBD4O95243 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC21.35■■□□□ 1.01
MBD4O95243 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
MBD4O95243 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
MBD4O95243 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
MBD4O95243 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MBD4O95243 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.34■■□□□ 1.01
MBD4O95243 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
MBD4O95243 MED29-202ENST00000594368 1471 ntTSL 2 BASIC21.34■■□□□ 1.01
MBD4O95243 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MBD4O95243 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms