Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.8■□□□□ 0.12
KDM4BO94953 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KDM4BO94953 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
KDM4BO94953 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KDM4BO94953 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
KDM4BO94953 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
KDM4BO94953 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KDM4BO94953 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KDM4BO94953 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
KDM4BO94953 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
KDM4BO94953 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KDM4BO94953 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KDM4BO94953 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
KDM4BO94953 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KDM4BO94953 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KDM4BO94953 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
KDM4BO94953 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KDM4BO94953 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.8■□□□□ 0.12
KDM4BO94953 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KDM4BO94953 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.8■□□□□ 0.12
KDM4BO94953 ABHD17AP1-201ENST00000358206 933 ntBASIC15.8■□□□□ 0.12
KDM4BO94953 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KDM4BO94953 RPS2P55-201ENST00000397318 883 ntBASIC15.8■□□□□ 0.12
KDM4BO94953 AC012618.2-201ENST00000428058 849 ntBASIC15.8■□□□□ 0.12
KDM4BO94953 MFAP1P1-201ENST00000442257 1255 ntBASIC15.8■□□□□ 0.12
KDM4BO94953 GCSHP5-201ENST00000443090 522 ntBASIC15.8■□□□□ 0.12
KDM4BO94953 AC107956.1-201ENST00000494359 873 ntBASIC15.8■□□□□ 0.12
KDM4BO94953 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.8■□□□□ 0.12
KDM4BO94953 AC008622.2-201ENST00000617006 1229 ntBASIC15.8■□□□□ 0.12
KDM4BO94953 AC018695.7-201ENST00000624587 2492 ntBASIC15.8■□□□□ 0.12
KDM4BO94953 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
KDM4BO94953 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
KDM4BO94953 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
KDM4BO94953 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
KDM4BO94953 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC15.8■□□□□ 0.12
KDM4BO94953 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
KDM4BO94953 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
KDM4BO94953 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
KDM4BO94953 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.79■□□□□ 0.12
KDM4BO94953 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
KDM4BO94953 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.79■□□□□ 0.12
KDM4BO94953 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.79■□□□□ 0.12
KDM4BO94953 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
KDM4BO94953 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
KDM4BO94953 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.79■□□□□ 0.12
KDM4BO94953 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
KDM4BO94953 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.79■□□□□ 0.12
KDM4BO94953 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.79■□□□□ 0.12
KDM4BO94953 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 AC233702.5-201ENST00000584107 538 ntBASIC15.79■□□□□ 0.12
KDM4BO94953 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
KDM4BO94953 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
KDM4BO94953 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
KDM4BO94953 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
KDM4BO94953 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.79■□□□□ 0.12
KDM4BO94953 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC15.79■□□□□ 0.12
KDM4BO94953 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
KDM4BO94953 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.79■□□□□ 0.12
KDM4BO94953 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.79■□□□□ 0.12
KDM4BO94953 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
KDM4BO94953 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.79■□□□□ 0.12
KDM4BO94953 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.78■□□□□ 0.12
KDM4BO94953 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.78■□□□□ 0.12
KDM4BO94953 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDM4BO94953 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
KDM4BO94953 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDM4BO94953 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDM4BO94953 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDM4BO94953 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDM4BO94953 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDM4BO94953 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDM4BO94953 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.78■□□□□ 0.12
KDM4BO94953 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDM4BO94953 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDM4BO94953 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDM4BO94953 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
KDM4BO94953 AP000593.1-201ENST00000393668 712 ntBASIC15.78■□□□□ 0.12
KDM4BO94953 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
KDM4BO94953 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.78■□□□□ 0.12
KDM4BO94953 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 562.9 ms