Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 AC099343.3-201ENST00000605834 2503 ntBASIC18.01■□□□□ 0.47
GPC4O75487 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
GPC4O75487 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
GPC4O75487 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
GPC4O75487 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
GPC4O75487 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.01■□□□□ 0.47
GPC4O75487 STARP1-201ENST00000397973 869 ntBASIC18.01■□□□□ 0.47
GPC4O75487 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.01■□□□□ 0.47
GPC4O75487 RASA4DP-201ENST00000460726 1199 ntBASIC18.01■□□□□ 0.47
GPC4O75487 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.01■□□□□ 0.47
GPC4O75487 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.01■□□□□ 0.47
GPC4O75487 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.01■□□□□ 0.47
GPC4O75487 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.01■□□□□ 0.47
GPC4O75487 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.01■□□□□ 0.47
GPC4O75487 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
GPC4O75487 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.01■□□□□ 0.47
GPC4O75487 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
GPC4O75487 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18■□□□□ 0.47
GPC4O75487 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18■□□□□ 0.47
GPC4O75487 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18■□□□□ 0.47
GPC4O75487 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
GPC4O75487 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
GPC4O75487 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GPC4O75487 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GPC4O75487 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18■□□□□ 0.47
GPC4O75487 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
GPC4O75487 PVRIG2P-201ENST00000435460 978 ntBASIC18■□□□□ 0.47
GPC4O75487 FAM210CP-201ENST00000445714 574 ntBASIC18■□□□□ 0.47
GPC4O75487 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18■□□□□ 0.47
GPC4O75487 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
GPC4O75487 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18■□□□□ 0.47
GPC4O75487 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18■□□□□ 0.47
GPC4O75487 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18■□□□□ 0.47
GPC4O75487 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18■□□□□ 0.47
GPC4O75487 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
GPC4O75487 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
GPC4O75487 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18■□□□□ 0.47
GPC4O75487 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
GPC4O75487 AC093677.2-201ENST00000600169 1863 ntBASIC18■□□□□ 0.47
GPC4O75487 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18■□□□□ 0.47
GPC4O75487 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18■□□□□ 0.47
GPC4O75487 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
GPC4O75487 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GPC4O75487 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18■□□□□ 0.47
GPC4O75487 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
GPC4O75487 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18■□□□□ 0.47
GPC4O75487 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GPC4O75487 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
GPC4O75487 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GPC4O75487 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GPC4O75487 AC138028.4-201ENST00000564984 1845 ntBASIC18■□□□□ 0.47
GPC4O75487 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
GPC4O75487 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GPC4O75487 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18■□□□□ 0.47
GPC4O75487 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18■□□□□ 0.47
GPC4O75487 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
GPC4O75487 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
GPC4O75487 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.99■□□□□ 0.47
GPC4O75487 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.99■□□□□ 0.47
GPC4O75487 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
GPC4O75487 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.99■□□□□ 0.47
GPC4O75487 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.99■□□□□ 0.47
GPC4O75487 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.99■□□□□ 0.47
GPC4O75487 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.99■□□□□ 0.47
GPC4O75487 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
GPC4O75487 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
GPC4O75487 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.99■□□□□ 0.47
GPC4O75487 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.99■□□□□ 0.47
GPC4O75487 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.99■□□□□ 0.47
GPC4O75487 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
GPC4O75487 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
GPC4O75487 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GPC4O75487 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms