Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CACNA1FO60840 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
CACNA1FO60840 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CACNA1FO60840 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CACNA1FO60840 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC22.47■■□□□ 1.19
CACNA1FO60840 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CACNA1FO60840 KRT18P67-201ENST00000432816 1264 ntBASIC22.47■■□□□ 1.19
CACNA1FO60840 TPM1-218ENST00000559281 851 ntTSL 5 BASIC22.47■■□□□ 1.19
CACNA1FO60840 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC22.47■■□□□ 1.19
CACNA1FO60840 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
CACNA1FO60840 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
CACNA1FO60840 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC22.47■■□□□ 1.19
CACNA1FO60840 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC22.47■■□□□ 1.19
CACNA1FO60840 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CACNA1FO60840 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CACNA1FO60840 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC22.47■■□□□ 1.19
CACNA1FO60840 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC22.47■■□□□ 1.19
CACNA1FO60840 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC22.47■■□□□ 1.19
CACNA1FO60840 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC22.47■■□□□ 1.19
CACNA1FO60840 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
CACNA1FO60840 NOC2LP2-201ENST00000407594 1944 ntBASIC22.47■■□□□ 1.19
CACNA1FO60840 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC22.46■■□□□ 1.19
CACNA1FO60840 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CACNA1FO60840 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CACNA1FO60840 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC22.46■■□□□ 1.19
CACNA1FO60840 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC22.46■■□□□ 1.19
CACNA1FO60840 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CACNA1FO60840 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
CACNA1FO60840 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CACNA1FO60840 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CACNA1FO60840 MRPL3P1-201ENST00000400109 1033 ntBASIC22.46■■□□□ 1.19
CACNA1FO60840 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.46■■□□□ 1.19
CACNA1FO60840 SCARNA2-201ENST00000458748 420 ntBASIC22.46■■□□□ 1.19
CACNA1FO60840 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CACNA1FO60840 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CACNA1FO60840 MIR5100-201ENST00000579544 119 ntBASIC22.46■■□□□ 1.19
CACNA1FO60840 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CACNA1FO60840 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CACNA1FO60840 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC22.46■■□□□ 1.19
CACNA1FO60840 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22.46■■□□□ 1.19
CACNA1FO60840 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CACNA1FO60840 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CACNA1FO60840 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CACNA1FO60840 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CACNA1FO60840 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
CACNA1FO60840 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CACNA1FO60840 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
CACNA1FO60840 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CACNA1FO60840 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CACNA1FO60840 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CACNA1FO60840 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CACNA1FO60840 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CACNA1FO60840 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CACNA1FO60840 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC22.45■■□□□ 1.18
CACNA1FO60840 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CACNA1FO60840 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CACNA1FO60840 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC22.45■■□□□ 1.18
CACNA1FO60840 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC22.45■■□□□ 1.18
CACNA1FO60840 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC22.45■■□□□ 1.18
CACNA1FO60840 MED16-201ENST00000269814 1199 ntTSL 5 BASIC22.45■■□□□ 1.18
CACNA1FO60840 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC22.45■■□□□ 1.18
CACNA1FO60840 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC22.45■■□□□ 1.18
CACNA1FO60840 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC22.45■■□□□ 1.18
CACNA1FO60840 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC22.45■■□□□ 1.18
CACNA1FO60840 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
CACNA1FO60840 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC22.45■■□□□ 1.18
CACNA1FO60840 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CACNA1FO60840 MTDHP3-201ENST00000594186 672 ntBASIC22.45■■□□□ 1.18
CACNA1FO60840 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC22.44■■□□□ 1.18
CACNA1FO60840 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC22.44■■□□□ 1.18
CACNA1FO60840 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CACNA1FO60840 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CACNA1FO60840 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC22.44■■□□□ 1.18
CACNA1FO60840 IRF8-202ENST00000562492 946 ntTSL 3 BASIC22.44■■□□□ 1.18
CACNA1FO60840 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC22.44■■□□□ 1.18
CACNA1FO60840 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
CACNA1FO60840 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC22.44■■□□□ 1.18
CACNA1FO60840 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CACNA1FO60840 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
CACNA1FO60840 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC22.44■■□□□ 1.18
CACNA1FO60840 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC22.44■■□□□ 1.18
CACNA1FO60840 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
CACNA1FO60840 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CACNA1FO60840 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC22.44■■□□□ 1.18
CACNA1FO60840 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
CACNA1FO60840 AC009336.1-201ENST00000608941 1553 ntBASIC22.44■■□□□ 1.18
CACNA1FO60840 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CACNA1FO60840 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CACNA1FO60840 ENSA-206ENST00000361631 725 ntTSL 2 BASIC22.43■■□□□ 1.18
CACNA1FO60840 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC22.43■■□□□ 1.18
CACNA1FO60840 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC22.43■■□□□ 1.18
CACNA1FO60840 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CACNA1FO60840 FDX1P1-201ENST00000449115 551 ntBASIC22.43■■□□□ 1.18
CACNA1FO60840 STK19B-204ENST00000512515 211 ntBASIC22.43■■□□□ 1.18
CACNA1FO60840 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.43■■□□□ 1.18
CACNA1FO60840 COX5A-204ENST00000567270 579 ntTSL 3 BASIC22.43■■□□□ 1.18
CACNA1FO60840 AC073592.4-201ENST00000623827 446 ntBASIC22.43■■□□□ 1.18
CACNA1FO60840 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
CACNA1FO60840 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CACNA1FO60840 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms