Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
PRAMEF4O60810 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF4O60810 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.27■□□□□ 0.35
PRAMEF4O60810 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF4O60810 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PRAMEF4O60810 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEF4O60810 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF4O60810 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF4O60810 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEF4O60810 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF4O60810 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF4O60810 TSPY12P-201ENST00000421279 868 ntBASIC17.26■□□□□ 0.35
PRAMEF4O60810 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF4O60810 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.26■□□□□ 0.35
PRAMEF4O60810 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.26■□□□□ 0.35
PRAMEF4O60810 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEF4O60810 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.26■□□□□ 0.35
PRAMEF4O60810 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.26■□□□□ 0.35
PRAMEF4O60810 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.26■□□□□ 0.35
PRAMEF4O60810 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF4O60810 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEF4O60810 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF4O60810 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PRAMEF4O60810 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF4O60810 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF4O60810 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF4O60810 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PRAMEF4O60810 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF4O60810 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF4O60810 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF4O60810 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.25■□□□□ 0.35
PRAMEF4O60810 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
PRAMEF4O60810 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
PRAMEF4O60810 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF4O60810 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF4O60810 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF4O60810 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.25■□□□□ 0.35
PRAMEF4O60810 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.25■□□□□ 0.35
PRAMEF4O60810 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.25■□□□□ 0.35
PRAMEF4O60810 AC112698.1-201ENST00000510299 916 ntBASIC17.25■□□□□ 0.35
PRAMEF4O60810 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.25■□□□□ 0.35
PRAMEF4O60810 NTF6B-201ENST00000591913 560 ntBASIC17.25■□□□□ 0.35
PRAMEF4O60810 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.25■□□□□ 0.35
PRAMEF4O60810 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF4O60810 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF4O60810 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF4O60810 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF4O60810 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF4O60810 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF4O60810 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF4O60810 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PRAMEF4O60810 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.25■□□□□ 0.35
PRAMEF4O60810 REXO1L11P-201ENST00000620964 1927 ntBASIC17.25■□□□□ 0.35
PRAMEF4O60810 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.25■□□□□ 0.35
PRAMEF4O60810 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.24■□□□□ 0.35
PRAMEF4O60810 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF4O60810 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF4O60810 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PRAMEF4O60810 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.24■□□□□ 0.35
PRAMEF4O60810 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF4O60810 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF4O60810 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.24■□□□□ 0.35
PRAMEF4O60810 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF4O60810 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF4O60810 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.24■□□□□ 0.35
PRAMEF4O60810 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF4O60810 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF4O60810 AL645929.1-201ENST00000420084 975 ntBASIC17.24■□□□□ 0.35
PRAMEF4O60810 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF4O60810 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.24■□□□□ 0.35
PRAMEF4O60810 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF4O60810 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PRAMEF4O60810 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF4O60810 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF4O60810 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF4O60810 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF4O60810 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRAMEF4O60810 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PRAMEF4O60810 FZD10-202ENST00000539839 3282 ntBASIC17.23■□□□□ 0.35
PRAMEF4O60810 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF4O60810 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
PRAMEF4O60810 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF4O60810 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF4O60810 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PRAMEF4O60810 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF4O60810 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF4O60810 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.23■□□□□ 0.35
PRAMEF4O60810 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PRAMEF4O60810 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF4O60810 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF4O60810 MTCL1P1-201ENST00000446207 792 ntBASIC17.23■□□□□ 0.35
PRAMEF4O60810 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF4O60810 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEF4O60810 AL136038.3-201ENST00000561909 1096 ntBASIC17.23■□□□□ 0.35
PRAMEF4O60810 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.23■□□□□ 0.35
PRAMEF4O60810 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.23■□□□□ 0.35
PRAMEF4O60810 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF4O60810 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF4O60810 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRAMEF4O60810 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms