Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.13■□□□□ 0.17
ZIC3O60481 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.13■□□□□ 0.17
ZIC3O60481 AC011467.2-201ENST00000598425 242 ntBASIC16.13■□□□□ 0.17
ZIC3O60481 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.13■□□□□ 0.17
ZIC3O60481 AC114341.1-201ENST00000618070 349 ntBASIC16.13■□□□□ 0.17
ZIC3O60481 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.13■□□□□ 0.17
ZIC3O60481 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.13■□□□□ 0.17
ZIC3O60481 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.13■□□□□ 0.17
ZIC3O60481 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.13■□□□□ 0.17
ZIC3O60481 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
ZIC3O60481 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ZIC3O60481 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 AC020763.4-201ENST00000623414 4170 ntBASIC16.12■□□□□ 0.17
ZIC3O60481 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ZIC3O60481 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.12■□□□□ 0.17
ZIC3O60481 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.12■□□□□ 0.17
ZIC3O60481 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.12■□□□□ 0.17
ZIC3O60481 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ZIC3O60481 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.12■□□□□ 0.17
ZIC3O60481 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.12■□□□□ 0.17
ZIC3O60481 NUS1P2-201ENST00000417358 873 ntBASIC16.12■□□□□ 0.17
ZIC3O60481 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ZIC3O60481 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.12■□□□□ 0.17
ZIC3O60481 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.12■□□□□ 0.17
ZIC3O60481 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.12■□□□□ 0.17
ZIC3O60481 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.12■□□□□ 0.17
ZIC3O60481 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.12■□□□□ 0.17
ZIC3O60481 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.12■□□□□ 0.17
ZIC3O60481 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.12■□□□□ 0.17
ZIC3O60481 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.12■□□□□ 0.17
ZIC3O60481 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.12■□□□□ 0.17
ZIC3O60481 AL390961.4-201ENST00000623958 2535 ntBASIC16.12■□□□□ 0.17
ZIC3O60481 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ZIC3O60481 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ZIC3O60481 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.12■□□□□ 0.17
ZIC3O60481 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.12■□□□□ 0.17
ZIC3O60481 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ZIC3O60481 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ZIC3O60481 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC3O60481 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.11■□□□□ 0.17
ZIC3O60481 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC3O60481 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC3O60481 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC3O60481 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.11■□□□□ 0.17
ZIC3O60481 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC3O60481 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC3O60481 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC3O60481 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.11■□□□□ 0.17
ZIC3O60481 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC3O60481 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
ZIC3O60481 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.11■□□□□ 0.17
ZIC3O60481 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC3O60481 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.11■□□□□ 0.17
ZIC3O60481 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC3O60481 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.11■□□□□ 0.17
ZIC3O60481 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC3O60481 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC3O60481 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC3O60481 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC3O60481 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC3O60481 AC007967.3-201ENST00000434308 558 ntBASIC16.11■□□□□ 0.17
ZIC3O60481 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.11■□□□□ 0.17
ZIC3O60481 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.11■□□□□ 0.17
ZIC3O60481 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ZIC3O60481 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.11■□□□□ 0.17
ZIC3O60481 AL591684.3-201ENST00000605187 298 ntBASIC16.11■□□□□ 0.17
ZIC3O60481 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms