Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.94■□□□□ 0.3
URB1O60287 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.94■□□□□ 0.3
URB1O60287 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.94■□□□□ 0.3
URB1O60287 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.94■□□□□ 0.3
URB1O60287 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.94■□□□□ 0.3
URB1O60287 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.94■□□□□ 0.3
URB1O60287 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
URB1O60287 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
URB1O60287 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
URB1O60287 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
URB1O60287 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
URB1O60287 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.93■□□□□ 0.3
URB1O60287 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
URB1O60287 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
URB1O60287 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
URB1O60287 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.93■□□□□ 0.3
URB1O60287 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
URB1O60287 TSEN15P1-201ENST00000423257 515 ntBASIC16.93■□□□□ 0.3
URB1O60287 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.93■□□□□ 0.3
URB1O60287 PRSS29P-201ENST00000440800 595 ntBASIC16.93■□□□□ 0.3
URB1O60287 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.93■□□□□ 0.3
URB1O60287 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.93■□□□□ 0.3
URB1O60287 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.93■□□□□ 0.3
URB1O60287 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
URB1O60287 AJ011932.1-201ENST00000621707 465 ntBASIC16.93■□□□□ 0.3
URB1O60287 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
URB1O60287 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.93■□□□□ 0.3
URB1O60287 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
URB1O60287 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
URB1O60287 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
URB1O60287 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
URB1O60287 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
URB1O60287 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
URB1O60287 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.93■□□□□ 0.3
URB1O60287 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.93■□□□□ 0.3
URB1O60287 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.93■□□□□ 0.3
URB1O60287 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
URB1O60287 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
URB1O60287 AC027612.4-201ENST00000605371 583 ntBASIC16.93■□□□□ 0.3
URB1O60287 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.93■□□□□ 0.3
URB1O60287 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.92■□□□□ 0.3
URB1O60287 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.92■□□□□ 0.3
URB1O60287 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.92■□□□□ 0.3
URB1O60287 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
URB1O60287 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 Z98044.1-201ENST00000632503 1764 ntBASIC16.92■□□□□ 0.3
URB1O60287 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.92■□□□□ 0.3
URB1O60287 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.92■□□□□ 0.3
URB1O60287 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
URB1O60287 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.92■□□□□ 0.3
URB1O60287 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
URB1O60287 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
URB1O60287 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.92■□□□□ 0.3
URB1O60287 AC093028.1-201ENST00000622998 982 ntBASIC16.92■□□□□ 0.3
URB1O60287 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
URB1O60287 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.92■□□□□ 0.3
URB1O60287 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
URB1O60287 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.92■□□□□ 0.3
URB1O60287 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
URB1O60287 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
URB1O60287 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
URB1O60287 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.91■□□□□ 0.3
URB1O60287 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.91■□□□□ 0.3
URB1O60287 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
URB1O60287 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.91■□□□□ 0.3
URB1O60287 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
URB1O60287 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
URB1O60287 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
URB1O60287 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
URB1O60287 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
URB1O60287 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms