Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.32■□□□□ 0.36
SLC28A2O43868 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SLC28A2O43868 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SLC28A2O43868 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC28A2O43868 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC28A2O43868 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC28A2O43868 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC28A2O43868 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SLC28A2O43868 AL133373.2-201ENST00000623187 2828 ntBASIC17.31■□□□□ 0.36
SLC28A2O43868 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC28A2O43868 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC28A2O43868 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLC28A2O43868 IL9RP2-201ENST00000423948 1312 ntBASIC17.31■□□□□ 0.36
SLC28A2O43868 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC28A2O43868 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC28A2O43868 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC28A2O43868 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC28A2O43868 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC28A2O43868 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC28A2O43868 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC28A2O43868 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC28A2O43868 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC28A2O43868 AC012615.1-201ENST00000565797 1299 ntBASIC17.31■□□□□ 0.36
SLC28A2O43868 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.31■□□□□ 0.36
SLC28A2O43868 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLC28A2O43868 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC28A2O43868 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC28A2O43868 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.31■□□□□ 0.36
SLC28A2O43868 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC28A2O43868 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.31■□□□□ 0.36
SLC28A2O43868 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC28A2O43868 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC28A2O43868 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC28A2O43868 MYLKP1-201ENST00000509077 1580 ntBASIC17.31■□□□□ 0.36
SLC28A2O43868 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC28A2O43868 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC28A2O43868 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC28A2O43868 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC28A2O43868 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC28A2O43868 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC28A2O43868 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC28A2O43868 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC28A2O43868 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SLC28A2O43868 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC28A2O43868 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
SLC28A2O43868 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC28A2O43868 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC28A2O43868 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC28A2O43868 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC28A2O43868 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC28A2O43868 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
SLC28A2O43868 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC28A2O43868 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC28A2O43868 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC28A2O43868 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC28A2O43868 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC28A2O43868 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC28A2O43868 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SLC28A2O43868 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC28A2O43868 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.3■□□□□ 0.36
SLC28A2O43868 KRT16P4-201ENST00000453883 522 ntBASIC17.3■□□□□ 0.36
SLC28A2O43868 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC28A2O43868 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC28A2O43868 AC138894.3-201ENST00000603787 634 ntBASIC17.3■□□□□ 0.36
SLC28A2O43868 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC28A2O43868 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC28A2O43868 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC28A2O43868 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC28A2O43868 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC28A2O43868 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC28A2O43868 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC28A2O43868 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SLC28A2O43868 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC28A2O43868 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC28A2O43868 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC28A2O43868 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC28A2O43868 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC28A2O43868 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC28A2O43868 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC28A2O43868 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC28A2O43868 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC28A2O43868 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC28A2O43868 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC28A2O43868 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC28A2O43868 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC28A2O43868 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SLC28A2O43868 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC28A2O43868 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SLC28A2O43868 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.29■□□□□ 0.36
SLC28A2O43868 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC28A2O43868 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SLC28A2O43868 AL023284.2-201ENST00000405850 579 ntBASIC17.29■□□□□ 0.36
SLC28A2O43868 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.29■□□□□ 0.36
SLC28A2O43868 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SLC28A2O43868 BX842568.4-201ENST00000421222 227 ntBASIC17.29■□□□□ 0.36
SLC28A2O43868 MCCD1P1-208ENST00000445732 328 ntBASIC17.29■□□□□ 0.36
SLC28A2O43868 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.29■□□□□ 0.36
SLC28A2O43868 TOB2P1-201ENST00000469761 992 ntBASIC17.29■□□□□ 0.36
SLC28A2O43868 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.29■□□□□ 0.36
SLC28A2O43868 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms