Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXS1O43638 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXS1O43638 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXS1O43638 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXS1O43638 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXS1O43638 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXS1O43638 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXS1O43638 AC007967.3-201ENST00000434308 558 ntBASIC16.86■□□□□ 0.29
FOXS1O43638 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXS1O43638 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXS1O43638 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXS1O43638 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
FOXS1O43638 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.86■□□□□ 0.29
FOXS1O43638 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXS1O43638 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.86■□□□□ 0.29
FOXS1O43638 AL121894.2-201ENST00000602977 491 ntBASIC16.86■□□□□ 0.29
FOXS1O43638 AL591684.3-201ENST00000605187 298 ntBASIC16.86■□□□□ 0.29
FOXS1O43638 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.86■□□□□ 0.29
FOXS1O43638 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXS1O43638 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXS1O43638 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXS1O43638 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXS1O43638 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXS1O43638 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXS1O43638 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
FOXS1O43638 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
FOXS1O43638 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXS1O43638 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
FOXS1O43638 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.86■□□□□ 0.29
FOXS1O43638 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
FOXS1O43638 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
FOXS1O43638 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.85■□□□□ 0.29
FOXS1O43638 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXS1O43638 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
FOXS1O43638 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.85■□□□□ 0.29
FOXS1O43638 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
FOXS1O43638 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXS1O43638 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXS1O43638 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
FOXS1O43638 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.85■□□□□ 0.29
FOXS1O43638 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXS1O43638 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.85■□□□□ 0.29
FOXS1O43638 RN7SL510P-201ENST00000581311 263 ntBASIC16.85■□□□□ 0.29
FOXS1O43638 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXS1O43638 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXS1O43638 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXS1O43638 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
FOXS1O43638 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXS1O43638 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXS1O43638 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
FOXS1O43638 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXS1O43638 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
FOXS1O43638 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXS1O43638 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.85■□□□□ 0.29
FOXS1O43638 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
FOXS1O43638 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.85■□□□□ 0.29
FOXS1O43638 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXS1O43638 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXS1O43638 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
FOXS1O43638 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXS1O43638 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.84■□□□□ 0.29
FOXS1O43638 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
FOXS1O43638 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXS1O43638 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXS1O43638 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FOXS1O43638 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXS1O43638 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXS1O43638 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.84■□□□□ 0.29
FOXS1O43638 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
FOXS1O43638 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.84■□□□□ 0.29
FOXS1O43638 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXS1O43638 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXS1O43638 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.84■□□□□ 0.29
FOXS1O43638 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.84■□□□□ 0.29
FOXS1O43638 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
FOXS1O43638 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.84■□□□□ 0.29
FOXS1O43638 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.84■□□□□ 0.29
FOXS1O43638 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.84■□□□□ 0.29
FOXS1O43638 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.84■□□□□ 0.29
FOXS1O43638 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.84■□□□□ 0.29
FOXS1O43638 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms