Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AC069152.1-201ENST00000438030 544 ntBASIC13.47□□□□□ -0.25
SNAI2O43623 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.47□□□□□ -0.25
SNAI2O43623 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.47□□□□□ -0.25
SNAI2O43623 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNAI2O43623 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNAI2O43623 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNAI2O43623 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNAI2O43623 AL118508.1-201ENST00000613502 2345 ntBASIC13.47□□□□□ -0.25
SNAI2O43623 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNAI2O43623 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNAI2O43623 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNAI2O43623 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.47□□□□□ -0.25
SNAI2O43623 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.47□□□□□ -0.25
SNAI2O43623 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.47□□□□□ -0.25
SNAI2O43623 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SNAI2O43623 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNAI2O43623 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SNAI2O43623 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SNAI2O43623 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC13.46□□□□□ -0.25
SNAI2O43623 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
SNAI2O43623 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
SNAI2O43623 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
SNAI2O43623 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.46□□□□□ -0.25
SNAI2O43623 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.46□□□□□ -0.25
SNAI2O43623 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
SNAI2O43623 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
SNAI2O43623 STK4-201ENST00000372801 2038 ntTSL 2 BASIC13.46□□□□□ -0.25
SNAI2O43623 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
SNAI2O43623 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.46□□□□□ -0.25
SNAI2O43623 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.46□□□□□ -0.25
SNAI2O43623 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
SNAI2O43623 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.46□□□□□ -0.25
SNAI2O43623 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC13.46□□□□□ -0.25
SNAI2O43623 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
SNAI2O43623 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.46□□□□□ -0.25
SNAI2O43623 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.46□□□□□ -0.25
SNAI2O43623 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.46□□□□□ -0.25
SNAI2O43623 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
SNAI2O43623 LINC00554-201ENST00000564841 3011 ntBASIC13.46□□□□□ -0.26
SNAI2O43623 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
SNAI2O43623 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNAI2O43623 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.46□□□□□ -0.26
SNAI2O43623 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
SNAI2O43623 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
SNAI2O43623 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
SNAI2O43623 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
SNAI2O43623 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNAI2O43623 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC13.45□□□□□ -0.26
SNAI2O43623 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
SNAI2O43623 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SNAI2O43623 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNAI2O43623 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNAI2O43623 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNAI2O43623 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNAI2O43623 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SNAI2O43623 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.45□□□□□ -0.26
SNAI2O43623 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNAI2O43623 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
SNAI2O43623 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNAI2O43623 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SNAI2O43623 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.45□□□□□ -0.26
SNAI2O43623 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SNAI2O43623 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNAI2O43623 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNAI2O43623 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNAI2O43623 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
SNAI2O43623 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.45□□□□□ -0.26
SNAI2O43623 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNAI2O43623 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNAI2O43623 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNAI2O43623 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
SNAI2O43623 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
SNAI2O43623 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
SNAI2O43623 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.45□□□□□ -0.26
SNAI2O43623 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
SNAI2O43623 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC13.45□□□□□ -0.26
SNAI2O43623 AC091390.4-202ENST00000476426 537 ntBASIC13.45□□□□□ -0.26
SNAI2O43623 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC13.45□□□□□ -0.26
SNAI2O43623 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.45□□□□□ -0.26
SNAI2O43623 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.45□□□□□ -0.26
SNAI2O43623 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
SNAI2O43623 AC008403.3-201ENST00000598924 454 ntBASIC13.45□□□□□ -0.26
SNAI2O43623 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.45□□□□□ -0.26
SNAI2O43623 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms