Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.89■□□□□ 0.13
SGCEO43556 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SGCEO43556 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
SGCEO43556 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
SGCEO43556 AC117947.1-201ENST00000427448 529 ntBASIC15.89■□□□□ 0.13
SGCEO43556 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.89■□□□□ 0.13
SGCEO43556 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.89■□□□□ 0.13
SGCEO43556 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC15.89■□□□□ 0.13
SGCEO43556 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.89■□□□□ 0.13
SGCEO43556 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.89■□□□□ 0.13
SGCEO43556 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.89■□□□□ 0.13
SGCEO43556 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.89■□□□□ 0.13
SGCEO43556 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SGCEO43556 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
SGCEO43556 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SGCEO43556 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SGCEO43556 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.89■□□□□ 0.13
SGCEO43556 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.89■□□□□ 0.13
SGCEO43556 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.89■□□□□ 0.13
SGCEO43556 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SGCEO43556 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SGCEO43556 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
SGCEO43556 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SGCEO43556 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.88■□□□□ 0.13
SGCEO43556 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.88■□□□□ 0.13
SGCEO43556 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
SGCEO43556 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
SGCEO43556 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 STARP1-201ENST00000397973 869 ntBASIC15.88■□□□□ 0.13
SGCEO43556 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SGCEO43556 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.88■□□□□ 0.13
SGCEO43556 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.88■□□□□ 0.13
SGCEO43556 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.88■□□□□ 0.13
SGCEO43556 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.88■□□□□ 0.13
SGCEO43556 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.88■□□□□ 0.13
SGCEO43556 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.88■□□□□ 0.13
SGCEO43556 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
SGCEO43556 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
SGCEO43556 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.88■□□□□ 0.13
SGCEO43556 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.88■□□□□ 0.13
SGCEO43556 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SGCEO43556 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.88■□□□□ 0.13
SGCEO43556 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SGCEO43556 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SGCEO43556 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.87■□□□□ 0.13
SGCEO43556 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
SGCEO43556 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SGCEO43556 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SGCEO43556 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SGCEO43556 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SGCEO43556 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.87■□□□□ 0.13
SGCEO43556 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.87■□□□□ 0.13
SGCEO43556 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SGCEO43556 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SGCEO43556 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SGCEO43556 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SGCEO43556 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SGCEO43556 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SGCEO43556 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SGCEO43556 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms