Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH17O14917 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH17O14917 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH17O14917 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PCDH17O14917 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 MYLKP1-201ENST00000509077 1580 ntBASIC17.15■□□□□ 0.34
PCDH17O14917 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH17O14917 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PCDH17O14917 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH17O14917 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDH17O14917 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
PCDH17O14917 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 AC093677.2-201ENST00000600169 1863 ntBASIC17.14■□□□□ 0.33
PCDH17O14917 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
PCDH17O14917 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH17O14917 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH17O14917 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH17O14917 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH17O14917 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH17O14917 AC005332.3-201ENST00000589904 676 ntBASIC17.14■□□□□ 0.33
PCDH17O14917 AC092329.2-201ENST00000598402 547 ntBASIC17.14■□□□□ 0.33
PCDH17O14917 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDH17O14917 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.14■□□□□ 0.33
PCDH17O14917 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDH17O14917 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDH17O14917 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
PCDH17O14917 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDH17O14917 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDH17O14917 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH17O14917 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDH17O14917 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
PCDH17O14917 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDH17O14917 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDH17O14917 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PCDH17O14917 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH17O14917 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH17O14917 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.13■□□□□ 0.33
PCDH17O14917 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDH17O14917 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 AC026396.1-201ENST00000419388 421 ntBASIC17.13■□□□□ 0.33
PCDH17O14917 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH17O14917 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH17O14917 DRAXINP1-201ENST00000437611 948 ntBASIC17.13■□□□□ 0.33
PCDH17O14917 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH17O14917 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.13■□□□□ 0.33
PCDH17O14917 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PCDH17O14917 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PCDH17O14917 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PCDH17O14917 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH17O14917 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PCDH17O14917 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.13■□□□□ 0.33
PCDH17O14917 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.13■□□□□ 0.33
PCDH17O14917 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms